Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   FOG18_RS09230 Genome accession   NZ_CP041668
Coordinates   2061569..2061910 (-) Length   113 a.a.
NCBI ID   WP_135060417.1    Uniprot ID   A0AAX1EGE3
Organism   Legionella israelensis strain L18-01051     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2056569..2066910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOG18_RS09205 (FOG18_09205) - 2056689..2056814 (-) 126 WP_143868041.1 multidrug transporter -
  FOG18_RS09210 (FOG18_09210) - 2056965..2058242 (-) 1278 WP_058502364.1 MFS transporter -
  FOG18_RS09215 (FOG18_09215) - 2058363..2059466 (-) 1104 WP_143868043.1 anhydro-N-acetylmuramic acid kinase -
  FOG18_RS09220 (FOG18_09220) - 2059615..2060784 (+) 1170 WP_065236005.1 MFS transporter -
  FOG18_RS09225 (FOG18_09225) - 2060762..2061553 (-) 792 WP_143868045.1 TatD family hydrolase -
  FOG18_RS09230 (FOG18_09230) pilZ 2061569..2061910 (-) 342 WP_135060417.1 PilZ domain-containing protein Machinery gene
  FOG18_RS09235 (FOG18_09235) - 2061907..2062851 (-) 945 WP_058502360.1 hypothetical protein -
  FOG18_RS09240 (FOG18_09240) tmk 2062838..2063482 (-) 645 WP_058502359.1 dTMP kinase -
  FOG18_RS09245 (FOG18_09245) mltG 2063482..2064477 (-) 996 WP_143868047.1 endolytic transglycosylase MltG -
  FOG18_RS09250 (FOG18_09250) fabF 2064478..2065716 (-) 1239 WP_143868049.1 beta-ketoacyl-ACP synthase II -
  FOG18_RS09255 (FOG18_09255) acpP 2065736..2065984 (-) 249 WP_058502356.1 acyl carrier protein -
  FOG18_RS09260 (FOG18_09260) fabG 2066152..2066901 (-) 750 WP_143868051.1 3-oxoacyl-ACP reductase FabG -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12714.95 Da        Isoelectric Point: 8.4622

>NTDB_id=372940 FOG18_RS09230 WP_135060417.1 2061569..2061910(-) (pilZ) [Legionella israelensis strain L18-01051]
MTSEMKEIRCTFTSEASLYLAYMPFVKGGGIFVRTIQNYSLTEKVKLCIKLMDETEPYVIEGKIIWITPKGAQGNKPAGI
GVQFCGEQKRYLCNKIETYLAGMLKSTQITDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=372940 FOG18_RS09230 WP_135060417.1 2061569..2061910(-) (pilZ) [Legionella israelensis strain L18-01051]
ATGACGAGTGAGATGAAGGAAATTCGTTGCACTTTTACAAGCGAGGCTTCTTTGTATCTTGCCTATATGCCATTTGTCAA
AGGCGGGGGCATTTTTGTCCGCACAATACAGAATTACTCCTTAACTGAAAAGGTCAAACTTTGTATCAAGCTAATGGATG
AAACGGAGCCTTATGTTATTGAAGGAAAAATCATCTGGATCACACCAAAAGGTGCCCAGGGTAACAAACCTGCCGGCATC
GGTGTTCAGTTTTGCGGTGAGCAAAAACGCTATTTATGTAATAAAATTGAGACCTATTTAGCCGGTATGTTAAAATCCAC
ACAAATCACCGATACAATTTAA

Domains


Predicted by InterproScan.

(8-100)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

67.257

100

0.673

  pilZ Legionella pneumophila strain ERS1305867

67.257

100

0.673


Multiple sequence alignment