Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | FN924_RS13040 | Genome accession | NZ_CP041666 |
| Coordinates | 2463379..2464329 (-) | Length | 316 a.a. |
| NCBI ID | WP_143895175.1 | Uniprot ID | A0A516KI52 |
| Organism | Radiobacillus deserti strain TKL69 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2458379..2469329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FN924_RS13015 (FN924_13015) | - | 2459076..2459540 (-) | 465 | WP_143895165.1 | chemotaxis protein CheW | - |
| FN924_RS13020 (FN924_13020) | - | 2459803..2460264 (-) | 462 | WP_143895167.1 | chemotaxis protein CheX | - |
| FN924_RS13025 (FN924_13025) | - | 2460613..2461569 (-) | 957 | WP_143895169.1 | siderophore ABC transporter substrate-binding protein | - |
| FN924_RS13030 (FN924_13030) | - | 2461687..2462445 (-) | 759 | WP_143895171.1 | ABC transporter ATP-binding protein | - |
| FN924_RS13035 (FN924_13035) | - | 2462439..2463386 (-) | 948 | WP_143895173.1 | iron chelate uptake ABC transporter family permease subunit | - |
| FN924_RS13040 (FN924_13040) | ceuB | 2463379..2464329 (-) | 951 | WP_143895175.1 | ABC transporter permease | Machinery gene |
| FN924_RS13045 (FN924_13045) | - | 2464492..2464794 (-) | 303 | WP_143895177.1 | iron-sulfur cluster assembly accessory protein | - |
| FN924_RS13050 (FN924_13050) | - | 2465279..2465533 (-) | 255 | WP_143895179.1 | alpha/beta-type small acid-soluble spore protein | - |
| FN924_RS13055 (FN924_13055) | - | 2465545..2465742 (-) | 198 | WP_228409438.1 | YozQ family protein | - |
| FN924_RS13060 (FN924_13060) | - | 2465907..2467046 (+) | 1140 | WP_143895183.1 | conserved virulence factor C family protein | - |
| FN924_RS13065 (FN924_13065) | - | 2467067..2467495 (+) | 429 | WP_143897217.1 | BrxA/BrxB family bacilliredoxin | - |
| FN924_RS13070 (FN924_13070) | - | 2467532..2467834 (-) | 303 | WP_143895185.1 | hypothetical protein | - |
| FN924_RS13075 (FN924_13075) | - | 2467956..2468129 (-) | 174 | WP_143895187.1 | YfhD family protein | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 35068.10 Da Isoelectric Point: 9.5572
>NTDB_id=372910 FN924_RS13040 WP_143895175.1 2463379..2464329(-) (ceuB) [Radiobacillus deserti strain TKL69]
MKKRYLVLALVVFSFASIFIGVSNVTPLDLFHFSDDQLDILWISRIPRLISIIIAGVTMSICGLIMQQLSRNKFVSPTTA
GTMDSARFGILVALMLFPTASLMQKMAVAFVFSLLGTFIFMSILERVKFKDAIFIPLVGLMFGNIVYSITTFFAYKNDLI
QNMSAWLQGNFALIIQGRYEILYISVPLVILTYFYANRFTIAGMGEEFATNLGLNHRFVVNVGLVIVALASTVVILTVGM
IPFLGLIIPNIVSMYQGDHLKKSLSHTALLGAVFVLFCDVLGRVIIYPYEIAIGVTVGVIGSGIFLYLIMRRSAYE
MKKRYLVLALVVFSFASIFIGVSNVTPLDLFHFSDDQLDILWISRIPRLISIIIAGVTMSICGLIMQQLSRNKFVSPTTA
GTMDSARFGILVALMLFPTASLMQKMAVAFVFSLLGTFIFMSILERVKFKDAIFIPLVGLMFGNIVYSITTFFAYKNDLI
QNMSAWLQGNFALIIQGRYEILYISVPLVILTYFYANRFTIAGMGEEFATNLGLNHRFVVNVGLVIVALASTVVILTVGM
IPFLGLIIPNIVSMYQGDHLKKSLSHTALLGAVFVLFCDVLGRVIIYPYEIAIGVTVGVIGSGIFLYLIMRRSAYE
Nucleotide
Download Length: 951 bp
>NTDB_id=372910 FN924_RS13040 WP_143895175.1 2463379..2464329(-) (ceuB) [Radiobacillus deserti strain TKL69]
ATGAAAAAAAGATATCTAGTACTTGCTTTAGTTGTATTTTCCTTTGCCTCCATATTTATTGGGGTTTCAAACGTAACACC
TTTAGACTTGTTCCACTTTTCGGACGATCAGCTAGATATACTGTGGATTAGTCGAATTCCAAGACTAATTAGCATTATTA
TTGCTGGAGTAACGATGAGTATTTGTGGATTAATTATGCAGCAATTGAGTCGGAACAAGTTTGTATCTCCGACTACGGCA
GGGACGATGGACTCTGCGAGATTTGGAATTTTAGTTGCGCTTATGCTATTTCCTACAGCTTCTCTAATGCAAAAGATGGC
CGTTGCCTTCGTGTTTTCTCTTTTGGGAACTTTCATTTTTATGAGTATTTTGGAACGAGTAAAGTTCAAGGATGCTATTT
TCATTCCGTTAGTTGGATTGATGTTTGGAAATATTGTTTATTCCATTACAACGTTCTTTGCTTATAAAAATGATTTAATT
CAAAACATGTCAGCATGGTTGCAAGGGAATTTTGCGTTAATTATCCAAGGGCGATATGAAATACTTTATATTAGCGTTCC
TTTGGTAATTCTTACGTATTTCTATGCAAATCGGTTTACGATAGCTGGTATGGGAGAAGAATTCGCAACAAATCTAGGTT
TAAATCATCGGTTTGTTGTCAATGTCGGACTAGTCATCGTTGCCTTAGCTTCAACCGTTGTAATCCTAACGGTAGGAATG
ATTCCGTTTTTAGGTCTGATCATTCCAAATATCGTTTCTATGTATCAAGGAGACCATTTAAAAAAGAGCCTTTCTCACAC
GGCCTTGTTAGGAGCTGTTTTCGTCCTATTTTGTGATGTGTTAGGTCGAGTGATTATTTATCCATACGAAATTGCGATTG
GAGTCACAGTTGGAGTTATCGGGAGCGGTATATTCTTATATCTAATTATGAGGAGATCTGCTTATGAGTAA
ATGAAAAAAAGATATCTAGTACTTGCTTTAGTTGTATTTTCCTTTGCCTCCATATTTATTGGGGTTTCAAACGTAACACC
TTTAGACTTGTTCCACTTTTCGGACGATCAGCTAGATATACTGTGGATTAGTCGAATTCCAAGACTAATTAGCATTATTA
TTGCTGGAGTAACGATGAGTATTTGTGGATTAATTATGCAGCAATTGAGTCGGAACAAGTTTGTATCTCCGACTACGGCA
GGGACGATGGACTCTGCGAGATTTGGAATTTTAGTTGCGCTTATGCTATTTCCTACAGCTTCTCTAATGCAAAAGATGGC
CGTTGCCTTCGTGTTTTCTCTTTTGGGAACTTTCATTTTTATGAGTATTTTGGAACGAGTAAAGTTCAAGGATGCTATTT
TCATTCCGTTAGTTGGATTGATGTTTGGAAATATTGTTTATTCCATTACAACGTTCTTTGCTTATAAAAATGATTTAATT
CAAAACATGTCAGCATGGTTGCAAGGGAATTTTGCGTTAATTATCCAAGGGCGATATGAAATACTTTATATTAGCGTTCC
TTTGGTAATTCTTACGTATTTCTATGCAAATCGGTTTACGATAGCTGGTATGGGAGAAGAATTCGCAACAAATCTAGGTT
TAAATCATCGGTTTGTTGTCAATGTCGGACTAGTCATCGTTGCCTTAGCTTCAACCGTTGTAATCCTAACGGTAGGAATG
ATTCCGTTTTTAGGTCTGATCATTCCAAATATCGTTTCTATGTATCAAGGAGACCATTTAAAAAAGAGCCTTTCTCACAC
GGCCTTGTTAGGAGCTGTTTTCGTCCTATTTTGTGATGTGTTAGGTCGAGTGATTATTTATCCATACGAAATTGCGATTG
GAGTCACAGTTGGAGTTATCGGGAGCGGTATATTCTTATATCTAATTATGAGGAGATCTGCTTATGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
52.396 |
99.051 |
0.519 |