Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | ARNIT_RS14365 | Genome accession | NC_014166 |
| Coordinates | 2884256..2884636 (+) | Length | 126 a.a. |
| NCBI ID | WP_013136652.1 | Uniprot ID | D5V787 |
| Organism | Arcobacter nitrofigilis DSM 7299 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2879256..2889636
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ARNIT_RS14340 (Arnit_2854) | - | 2879552..2879884 (-) | 333 | WP_013136647.1 | hypothetical protein | - |
| ARNIT_RS14345 (Arnit_2855) | - | 2879982..2881010 (-) | 1029 | WP_013136648.1 | hypothetical protein | - |
| ARNIT_RS14350 (Arnit_2856) | - | 2881032..2882384 (-) | 1353 | WP_013136649.1 | class II 3-deoxy-7-phosphoheptulonate synthase | - |
| ARNIT_RS14355 (Arnit_2857) | - | 2882413..2883405 (-) | 993 | WP_013136650.1 | transaldolase | - |
| ARNIT_RS14360 (Arnit_2858) | serB | 2883525..2884145 (-) | 621 | WP_013136651.1 | phosphoserine phosphatase SerB | - |
| ARNIT_RS14365 (Arnit_2859) | dprB | 2884256..2884636 (+) | 381 | WP_013136652.1 | Holliday junction resolvase RuvX | Machinery gene |
| ARNIT_RS14370 (Arnit_2860) | - | 2884838..2885152 (-) | 315 | WP_013136653.1 | hypothetical protein | - |
| ARNIT_RS14375 (Arnit_2861) | lpoB | 2885184..2885795 (-) | 612 | WP_013136654.1 | penicillin-binding protein activator LpoB | - |
| ARNIT_RS14380 (Arnit_2862) | - | 2885804..2886247 (-) | 444 | WP_013136655.1 | YcfL family protein | - |
| ARNIT_RS14385 (Arnit_2863) | - | 2886257..2887591 (-) | 1335 | WP_013136656.1 | COG3014 family protein | - |
| ARNIT_RS14390 (Arnit_2864) | acpS | 2887594..2887944 (-) | 351 | WP_013136657.1 | holo-ACP synthase | - |
| ARNIT_RS14395 (Arnit_2865) | - | 2888104..2889063 (+) | 960 | WP_013136658.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14383.70 Da Isoelectric Point: 9.4699
>NTDB_id=37265 ARNIT_RS14365 WP_013136652.1 2884256..2884636(+) (dprB) [Arcobacter nitrofigilis DSM 7299]
MKLASIDIGLKRIGVALSLTKTIVTPQTAILRKNRNQASNDVDNFLKEWEIEKLIVGFPSSSDDMQKRVKHFVNLLKFEG
EIVFQEENMSSIEAEELMKGDIKYKRDGRVDSLAAKIILERYLAKN
MKLASIDIGLKRIGVALSLTKTIVTPQTAILRKNRNQASNDVDNFLKEWEIEKLIVGFPSSSDDMQKRVKHFVNLLKFEG
EIVFQEENMSSIEAEELMKGDIKYKRDGRVDSLAAKIILERYLAKN
Nucleotide
Download Length: 381 bp
>NTDB_id=37265 ARNIT_RS14365 WP_013136652.1 2884256..2884636(+) (dprB) [Arcobacter nitrofigilis DSM 7299]
TTGAAATTAGCATCTATTGATATAGGATTAAAGAGAATTGGCGTAGCTTTAAGCCTTACAAAGACCATAGTTACCCCACA
AACAGCCATTTTAAGAAAAAATAGAAATCAAGCTTCAAATGATGTTGATAATTTTTTAAAAGAGTGGGAAATAGAGAAAC
TTATTGTTGGCTTTCCAAGTTCAAGTGATGATATGCAAAAAAGAGTAAAACACTTCGTAAATCTTCTAAAATTTGAAGGA
GAGATTGTTTTCCAAGAAGAGAATATGAGTTCCATAGAAGCAGAAGAGCTAATGAAAGGTGATATCAAATACAAAAGGGA
TGGAAGAGTTGATTCCCTTGCAGCTAAAATAATACTTGAGAGATATTTGGCAAAAAATTAA
TTGAAATTAGCATCTATTGATATAGGATTAAAGAGAATTGGCGTAGCTTTAAGCCTTACAAAGACCATAGTTACCCCACA
AACAGCCATTTTAAGAAAAAATAGAAATCAAGCTTCAAATGATGTTGATAATTTTTTAAAAGAGTGGGAAATAGAGAAAC
TTATTGTTGGCTTTCCAAGTTCAAGTGATGATATGCAAAAAAGAGTAAAACACTTCGTAAATCTTCTAAAATTTGAAGGA
GAGATTGTTTTCCAAGAAGAGAATATGAGTTCCATAGAAGCAGAAGAGCTAATGAAAGGTGATATCAAATACAAAAGGGA
TGGAAGAGTTGATTCCCTTGCAGCTAAAATAATACTTGAGAGATATTTGGCAAAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
50.394 |
100 |
0.508 |