Detailed information
Bioinformatically predicted
Overview
| Name | Cj0683 | Type | Machinery gene |
| Locus tag | CVULP_RS05960 | Genome accession | NZ_CP041617 |
| Coordinates | 1159766..1160194 (+) | Length | 142 a.a. |
| NCBI ID | WP_099506936.1 | Uniprot ID | - |
| Organism | Campylobacter vulpis strain 251/13 | ||
| Function | initialization of DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1154766..1165194
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CVULP_RS05920 | - | 1155321..1155503 (-) | 183 | WP_099507004.1 | hypothetical protein | - |
| CVULP_RS05925 | - | 1155617..1156114 (-) | 498 | WP_180753019.1 | sulfatase-like hydrolase/transferase | - |
| CVULP_RS05930 | - | 1156098..1156592 (-) | 495 | WP_252195504.1 | hypothetical protein | - |
| CVULP_RS05935 | - | 1156582..1156839 (-) | 258 | WP_252195902.1 | hypothetical protein | - |
| CVULP_RS05940 | - | 1156895..1157101 (-) | 207 | WP_265575618.1 | hypothetical protein | - |
| CVULP_RS05945 (CVULP_1158) | uvrB | 1157207..1159177 (-) | 1971 | WP_099506935.1 | excinuclease ABC subunit UvrB | - |
| CVULP_RS05950 (CVULP_1159) | - | 1159296..1159526 (+) | 231 | WP_027304113.1 | hypothetical protein | - |
| CVULP_RS05955 (CVULP_1160) | - | 1159516..1159788 (+) | 273 | WP_099460747.1 | hypothetical protein | - |
| CVULP_RS05960 (CVULP_1161) | Cj0683 | 1159766..1160194 (+) | 429 | WP_099506936.1 | type II secretion system protein | Machinery gene |
| CVULP_RS05965 (CVULP_1162) | - | 1160191..1162029 (+) | 1839 | WP_099506937.1 | primosomal protein N' | - |
| CVULP_RS05970 (CVULP_1163) | aat | 1162039..1162668 (+) | 630 | WP_099460750.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| CVULP_RS05975 (CVULP_1164) | - | 1162862..1163647 (+) | 786 | WP_099460812.1 | HrcA family transcriptional regulator | - |
| CVULP_RS05980 (CVULP_1165) | grpE | 1163644..1164150 (+) | 507 | WP_099460751.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 16359.39 Da Isoelectric Point: 8.7850
>NTDB_id=372476 CVULP_RS05960 WP_099506936.1 1159766..1160194(+) (Cj0683) [Campylobacter vulpis strain 251/13]
MSLKKAFSLLELVFVILIIAILTGIALPFLKQNKEEAKLLRLKMNYEMLNSALSLMRNEADLKNLSYISELDKAVILKEN
EALFYCQNCSFSLLSTPIYSSKMGWIKNGVNQYSFFLNPQKSVEFHYENGFLKCLKNCKELL
MSLKKAFSLLELVFVILIIAILTGIALPFLKQNKEEAKLLRLKMNYEMLNSALSLMRNEADLKNLSYISELDKAVILKEN
EALFYCQNCSFSLLSTPIYSSKMGWIKNGVNQYSFFLNPQKSVEFHYENGFLKCLKNCKELL
Nucleotide
Download Length: 429 bp
>NTDB_id=372476 CVULP_RS05960 WP_099506936.1 1159766..1160194(+) (Cj0683) [Campylobacter vulpis strain 251/13]
ATGAGTCTCAAAAAAGCCTTTAGTCTCCTTGAGCTTGTTTTTGTCATTCTTATCATAGCCATCTTGACAGGCATAGCCTT
GCCATTTCTTAAGCAAAATAAAGAAGAAGCCAAGCTTTTAAGACTTAAAATGAACTACGAAATGCTAAATTCCGCCCTAA
GTTTGATGAGAAATGAAGCGGATTTAAAAAATTTAAGCTATATAAGTGAACTAGATAAAGCGGTAATCTTAAAAGAAAAT
GAAGCCTTATTTTATTGCCAAAACTGCTCCTTTAGCCTTTTAAGCACTCCTATTTATTCTAGCAAAATGGGTTGGATTAA
AAACGGAGTCAATCAATATAGCTTTTTTTTAAACCCTCAAAAAAGCGTAGAATTTCACTATGAAAATGGGTTTTTAAAGT
GCCTTAAAAACTGCAAAGAGCTTTTATGA
ATGAGTCTCAAAAAAGCCTTTAGTCTCCTTGAGCTTGTTTTTGTCATTCTTATCATAGCCATCTTGACAGGCATAGCCTT
GCCATTTCTTAAGCAAAATAAAGAAGAAGCCAAGCTTTTAAGACTTAAAATGAACTACGAAATGCTAAATTCCGCCCTAA
GTTTGATGAGAAATGAAGCGGATTTAAAAAATTTAAGCTATATAAGTGAACTAGATAAAGCGGTAATCTTAAAAGAAAAT
GAAGCCTTATTTTATTGCCAAAACTGCTCCTTTAGCCTTTTAAGCACTCCTATTTATTCTAGCAAAATGGGTTGGATTAA
AAACGGAGTCAATCAATATAGCTTTTTTTTAAACCCTCAAAAAAGCGTAGAATTTCACTATGAAAATGGGTTTTTAAAGT
GCCTTAAAAACTGCAAAGAGCTTTTATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0683 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
52.414 |
100 |
0.535 |