Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | FK728_RS16470 | Genome accession | NZ_CP041587 |
| Coordinates | 3471191..3471664 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214059.1 | Uniprot ID | A0A009PK04 |
| Organism | Acinetobacter baumannii strain J9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3466191..3476664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK728_RS16455 (FK728_03263) | pilX | 3468820..3469638 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| FK728_RS16460 (FK728_03264) | pilW | 3469635..3470636 (-) | 1002 | WP_000079201.1 | PilW family protein | Machinery gene |
| FK728_RS16465 (FK728_03265) | pilV | 3470637..3471197 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| FK728_RS16470 (FK728_03266) | fimU | 3471191..3471664 (-) | 474 | WP_001214059.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| FK728_RS16475 (FK728_03267) | ispH | 3471834..3472784 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| FK728_RS16480 (FK728_03268) | gmk | 3472907..3473536 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| FK728_RS16485 (FK728_03269) | rpoZ | 3473609..3473887 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| FK728_RS16490 | - | 3473926..3474056 (+) | 131 | Protein_3199 | hypothetical protein | - |
| FK728_RS16495 (FK728_03270) | - | 3474096..3476201 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.47 Da Isoelectric Point: 9.3085
>NTDB_id=372406 FK728_RS16470 WP_001214059.1 3471191..3471664(-) (fimU) [Acinetobacter baumannii strain J9]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=372406 FK728_RS16470 WP_001214059.1 3471191..3471664(-) (fimU) [Acinetobacter baumannii strain J9]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |