Detailed information NTG0372346

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: G5S31_RS07565
• Genome accession: NZ_CP049090
• Coordinates: 1569854..1570837 (-)
• Length: 327 a.a.
• NCBI ID: WP_021119184.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain aHPS7
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1564854..1575837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5S31_RS07540 (G5S31_07525)	nudB	1566300..1566752 (+)	453	WP_021119185.1	dihydroneopterin triphosphate diphosphatase	-
G5S31_RS07545 (G5S31_07530)	-	1566843..1567583 (+)	741	WP_005712959.1	YebC/PmpR family DNA-binding transcriptional regulator	-
G5S31_RS07550 (G5S31_07535)	-	1567700..1568155 (+)	456	WP_021114038.1	hypothetical protein	-
G5S31_RS07555 (G5S31_07540)	ruvC	1568229..1568807 (+)	579	WP_010786348.1	crossover junction endodeoxyribonuclease RuvC	-
G5S31_RS07560 (G5S31_07545)	-	1568859..1569839 (-)	981	WP_021116057.1	peptide ABC transporter ATP-binding protein	-
G5S31_RS07565 (G5S31_07550)	amiE	1569854..1570837 (-)	984	WP_021119184.1	dipeptide ABC transporter ATP-binding protein	Regulator
G5S31_RS07570 (G5S31_07555)	-	1570848..1571741 (-)	894	WP_005712949.1	ABC transporter permease subunit	-
G5S31_RS07575 (G5S31_07560)	-	1572026..1573030 (-)	1005	WP_005712947.1	ABC transporter permease subunit	-
G5S31_RS07580 (G5S31_07565)	-	1573124..1574719 (-)	1596	WP_021119183.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35942.82 Da
• Isoelectric Point: 7.4230

>NTDB_id=372346 G5S31_RS07565 WP_021119184.1 1569854..1570837(-) (amiE) [Glaesserella parasuis strain aHPS7]
MALLKVDELSVHFGDKKAPFRAVDRVSYEVNESEVLGIVGESGSGKSVSSLAIMGLIDFPGRVMANSLRFNGHNLLDLKP
KEKQKIVGADVAMIFQDAMTSLNPSYTVGYQIMEALKVHQGGSKAWRKERAIELLTMVGIPDPTSRLDVYPHQLSGGMSQ
RVMIAMAIACNPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVAESAHRIIVMYAGQVVEEGKSEQ
IFKSPLHPYTQALLKALPEFAEGKSRLQSLPGVVPGKYDRPQGCLLNPRCPYATDLCRQKEPELRTVNGRQVKCHTPLNE
SGLPQPI

Nucleotide

• Length: 984 bp

>NTDB_id=372346 G5S31_RS07565 WP_021119184.1 1569854..1570837(-) (amiE) [Glaesserella parasuis strain aHPS7]
ATGGCATTATTAAAAGTAGATGAACTTTCGGTTCACTTTGGCGATAAAAAAGCCCCGTTTAGAGCGGTGGATCGAGTAAG
TTATGAAGTCAATGAAAGCGAAGTGCTAGGCATTGTGGGCGAGTCAGGTTCGGGTAAATCGGTCAGTTCCCTTGCAATTA
TGGGGCTTATTGATTTCCCTGGGCGTGTAATGGCAAATTCGTTACGTTTCAACGGACATAATCTGCTTGATTTAAAACCA
AAAGAGAAGCAGAAAATTGTCGGCGCTGATGTAGCGATGATTTTCCAAGATGCAATGACAAGCCTCAACCCAAGTTACAC
TGTGGGTTATCAAATTATGGAAGCCCTGAAGGTTCATCAAGGCGGTTCAAAAGCGTGGCGAAAAGAGCGTGCAATTGAAT
TATTGACGATGGTTGGCATTCCTGATCCAACATCTCGTTTAGATGTCTATCCGCACCAACTTTCAGGCGGTATGAGCCAA
CGTGTGATGATCGCCATGGCGATTGCTTGCAATCCGAAATTATTGATTGCTGACGAGCCGACAACGGCGTTAGATGTAAC
CATTCAAGCACAAATTATTGATTTATTGCTTGAGTTGCAACGCAAAGAAAATATGGCATTGATTTTGATCACTCACGATT
TAGCCTTAGTCGCCGAGTCGGCTCACCGTATTATCGTGATGTATGCAGGGCAAGTGGTAGAAGAAGGCAAGTCTGAACAA
ATTTTCAAATCACCGCTTCACCCTTATACCCAAGCGTTATTAAAAGCGTTGCCTGAGTTTGCAGAAGGTAAATCTCGCTT
GCAATCACTACCAGGTGTCGTGCCAGGTAAATATGACCGTCCGCAAGGTTGCTTGCTCAACCCACGCTGTCCGTATGCAA
CGGATTTATGCCGACAAAAAGAGCCAGAACTACGCACAGTAAACGGCAGACAGGTGAAATGCCATACGCCGTTGAATGAG
AGTGGATTGCCACAACCAATTTAG

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	44.268	96.024	0.425
amiE	Streptococcus thermophilus LMG 18311	43.631	96.024	0.419
amiE	Streptococcus thermophilus LMD-9	43.631	96.024	0.419
oppD	Streptococcus mutans UA159	44.118	93.578	0.413