Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FNK00_RS05785 | Genome accession | NZ_CP041584 |
| Coordinates | 1112070..1112372 (+) | Length | 100 a.a. |
| NCBI ID | WP_002875928.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain YH003 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1107070..1117372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNK00_RS05760 (FNK00_05760) | rpsR | 1107433..1107693 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FNK00_RS05765 (FNK00_05765) | lon | 1107753..1110128 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| FNK00_RS05770 (FNK00_05770) | - | 1110145..1110792 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| FNK00_RS05775 (FNK00_05775) | fliW | 1110953..1111342 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FNK00_RS05780 (FNK00_05780) | proC | 1111342..1112073 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FNK00_RS05785 (FNK00_05785) | ctsT | 1112070..1112372 (+) | 303 | WP_002875928.1 | hypothetical protein | Machinery gene |
| FNK00_RS05790 (FNK00_05790) | - | 1112369..1113031 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| FNK00_RS05795 (FNK00_05795) | - | 1113028..1113480 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FNK00_RS05800 (FNK00_05800) | hemD | 1113477..1114106 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| FNK00_RS05805 (FNK00_05805) | thiE | 1114084..1114716 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| FNK00_RS05810 (FNK00_05810) | thiD | 1114706..1115518 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FNK00_RS05815 (FNK00_05815) | - | 1115515..1116201 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| FNK00_RS05820 (FNK00_05820) | - | 1116198..1116959 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12161.32 Da Isoelectric Point: 9.0653
>NTDB_id=372308 FNK00_RS05785 WP_002875928.1 1112070..1112372(+) (ctsT) [Campylobacter jejuni strain YH003]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=372308 FNK00_RS05785 WP_002875928.1 1112070..1112372(+) (ctsT) [Campylobacter jejuni strain YH003]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |