Detailed information NTG0372270

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: G5C67_RS03525
• Genome accession: NZ_CP049089
• Coordinates: 664376..665359 (+)
• Length: 327 a.a.
• NCBI ID: WP_021116056.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain vHPS7
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 659376..670359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5C67_RS03510 (G5C67_03485)	-	660495..662090 (+)	1596	WP_075604947.1	ABC transporter substrate-binding protein	-
G5C67_RS03515 (G5C67_03490)	-	662184..663188 (+)	1005	WP_016527667.1	ABC transporter permease subunit	-
G5C67_RS03520 (G5C67_03495)	-	663472..664365 (+)	894	WP_021112627.1	ABC transporter permease subunit	-
G5C67_RS03525 (G5C67_03500)	amiE	664376..665359 (+)	984	WP_021116056.1	dipeptide ABC transporter ATP-binding protein	Regulator
G5C67_RS03530 (G5C67_03505)	-	665374..666354 (+)	981	WP_075630858.1	peptide ABC transporter ATP-binding protein	-
G5C67_RS03535 (G5C67_03510)	ruvC	666406..666984 (-)	579	WP_021110977.1	crossover junction endodeoxyribonuclease RuvC	-
G5C67_RS03540 (G5C67_03515)	-	667058..667510 (-)	453	WP_075606434.1	Holliday junction resolvase	-
G5C67_RS03545 (G5C67_03520)	-	667627..668367 (-)	741	WP_005712959.1	YebC/PmpR family DNA-binding transcriptional regulator	-
G5C67_RS03550 (G5C67_03525)	nudB	668458..668910 (-)	453	WP_021112611.1	dihydroneopterin triphosphate diphosphatase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35912.79 Da
• Isoelectric Point: 7.4230

>NTDB_id=372270 G5C67_RS03525 WP_021116056.1 664376..665359(+) (amiE) [Glaesserella parasuis strain vHPS7]
MALLKVDELSVHFGDKKAPFRAVDRVSYEVNEGEVLGIVGESGSGKSVSSLAIMGLIDFPGRVMANSLRFNGHNLLDLKP
KEKQKIVGADVAMIFQDAMTSLNPSYTVGYQIMEALKVHQGGSKAWRKERAIELLTMVGIPDPTSRLDVYPHQLSGGMSQ
RVMIAMAIACNPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVAESAHRIIVMYAGQVVEEGKSEQ
IFKSPLHPYTQALLKALPEFAEGKSRLQSLPGVVPGKYDRPQGCLLNPRCPYATDLCRQKEPELRTVNGRQVKCHTPLNE
SGLPQPI

Nucleotide

• Length: 984 bp

>NTDB_id=372270 G5C67_RS03525 WP_021116056.1 664376..665359(+) (amiE) [Glaesserella parasuis strain vHPS7]
ATGGCATTATTAAAAGTAGATGAACTTTCGGTTCACTTTGGCGATAAAAAAGCCCCGTTTAGAGCGGTGGATCGAGTAAG
TTATGAAGTCAATGAAGGCGAAGTGCTAGGCATTGTGGGCGAGTCAGGTTCGGGTAAATCGGTCAGTTCCCTTGCAATTA
TGGGGCTTATTGATTTCCCTGGGCGTGTAATGGCAAATTCGTTACGTTTCAACGGACATAATCTGCTTGATTTAAAACCA
AAAGAGAAGCAGAAAATTGTCGGCGCTGATGTAGCGATGATTTTCCAAGATGCAATGACAAGCCTCAACCCAAGTTACAC
TGTGGGTTATCAAATTATGGAAGCCTTGAAGGTTCATCAAGGCGGTTCAAAAGCGTGGCGAAAAGAGCGTGCAATTGAAT
TATTGACGATGGTTGGCATTCCTGATCCGACATCTCGTTTAGATGTCTATCCGCACCAACTTTCAGGCGGTATGAGCCAA
CGTGTGATGATCGCCATGGCGATTGCTTGCAATCCGAAATTATTGATTGCTGACGAGCCGACAACGGCGTTAGATGTAAC
CATTCAAGCACAAATTATTGATTTATTGCTTGAGTTGCAACGCAAAGAAAATATGGCATTGATTTTGATCACTCACGATT
TAGCCTTAGTCGCCGAGTCGGCTCACCGTATTATCGTGATGTATGCAGGGCAAGTGGTAGAAGAAGGCAAGTCTGAACAA
ATTTTCAAATCACCGCTTCACCCTTATACCCAAGCGTTATTAAAAGCGTTGCCTGAGTTTGCAGAAGGTAAATCTCGCTT
GCAATCACTACCAGGTGTCGTGCCAGGTAAATATGACCGTCCGCAAGGTTGCTTGCTCAACCCACGCTGTCCGTATGCAA
CGGATTTATGCCGACAAAAAGAGCCAGAACTACGCACAGTAAACGGCAGACAGGTGAAATGCCATACGCCGTTGAATGAG
AGTGGATTGCCACAACCAATTTAG

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	44.586	96.024	0.428
amiE	Streptococcus thermophilus LMG 18311	43.949	96.024	0.422
amiE	Streptococcus thermophilus LMD-9	43.949	96.024	0.422
oppD	Streptococcus mutans UA159	44.444	93.578	0.416