Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | G5C59_RS10600 | Genome accession | NZ_CP049088 |
| Coordinates | 2139824..2140429 (-) | Length | 201 a.a. |
| NCBI ID | WP_015939588.1 | Uniprot ID | B8F5Q8 |
| Organism | Glaesserella parasuis strain sHPS7 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2134824..2145429
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C59_RS10585 (G5C59_10540) | rpiA | 2136009..2136668 (+) | 660 | WP_021118404.1 | ribose-5-phosphate isomerase RpiA | - |
| G5C59_RS10590 (G5C59_10545) | serA | 2136731..2137963 (+) | 1233 | WP_005712064.1 | phosphoglycerate dehydrogenase | - |
| G5C59_RS10595 (G5C59_10550) | pyrG | 2138079..2139713 (-) | 1635 | WP_021112671.1 | glutamine hydrolyzing CTP synthase | - |
| G5C59_RS10600 (G5C59_10555) | recR | 2139824..2140429 (-) | 606 | WP_015939588.1 | recombination mediator RecR | Machinery gene |
| G5C59_RS10605 (G5C59_10560) | - | 2140496..2140825 (-) | 330 | WP_005712069.1 | YbaB/EbfC family nucleoid-associated protein | - |
| G5C59_RS10610 (G5C59_10565) | - | 2140985..2141647 (+) | 663 | WP_021111046.1 | pseudouridine synthase | - |
| G5C59_RS10615 (G5C59_10570) | galE | 2141712..2142728 (+) | 1017 | WP_016527616.1 | UDP-glucose 4-epimerase GalE | - |
| G5C59_RS10620 (G5C59_10575) | - | 2142731..2144002 (+) | 1272 | WP_021118403.1 | AmpG family muropeptide MFS transporter | - |
| G5C59_RS10625 (G5C59_10580) | tal | 2144117..2145067 (+) | 951 | WP_021118402.1 | transaldolase | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 22124.33 Da Isoelectric Point: 5.8690
>NTDB_id=372253 G5C59_RS10600 WP_015939588.1 2139824..2140429(-) (recR) [Glaesserella parasuis strain sHPS7]
MQSSPLLENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRTFTEEDECAICQNYRRQIS
GQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLEEESFQEVILATNPTIEGDATANYIAEM
CSIHNIKVTRIAHGIPVGSELEMVDGTSLSHSFVGRRDISL
MQSSPLLENLMEALRVLPGVGPKSAQRMAYHLLQRNRSGGVNLAKALSEAMTHIGHCKSCRTFTEEDECAICQNYRRQIS
GQLCVVEMPADIQAIEQTGQFSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLEEESFQEVILATNPTIEGDATANYIAEM
CSIHNIKVTRIAHGIPVGSELEMVDGTSLSHSFVGRRDISL
Nucleotide
Download Length: 606 bp
>NTDB_id=372253 G5C59_RS10600 WP_015939588.1 2139824..2140429(-) (recR) [Glaesserella parasuis strain sHPS7]
ATGCAAAGTAGCCCTTTACTTGAAAATCTTATGGAAGCCCTGCGTGTATTGCCTGGAGTCGGCCCAAAATCTGCACAACG
TATGGCGTATCATCTTTTACAGCGTAACCGCTCAGGCGGTGTGAATTTAGCTAAAGCATTGAGCGAAGCAATGACTCACA
TTGGACATTGCAAATCTTGCCGAACTTTTACTGAAGAAGATGAGTGTGCTATCTGCCAAAACTACCGCCGCCAAATCAGC
GGACAACTTTGTGTGGTTGAAATGCCTGCAGATATTCAAGCGATTGAACAAACTGGGCAATTTTCAGGGCGTTATTTCGT
ATTAATGGGACATCTATCTCCTTTAGATGGAATAGGACCTCGTGAAATTGGTTTAGATTTATTACAGAAACGCTTAGAAG
AAGAATCTTTTCAAGAAGTGATTCTGGCAACCAATCCAACGATTGAGGGGGATGCGACCGCAAATTATATCGCTGAGATG
TGTTCTATTCACAATATTAAAGTTACTCGTATTGCACACGGTATTCCTGTCGGAAGTGAATTAGAAATGGTTGACGGAAC
AAGCCTTTCTCATTCATTTGTAGGAAGACGGGATATTTCTTTATAA
ATGCAAAGTAGCCCTTTACTTGAAAATCTTATGGAAGCCCTGCGTGTATTGCCTGGAGTCGGCCCAAAATCTGCACAACG
TATGGCGTATCATCTTTTACAGCGTAACCGCTCAGGCGGTGTGAATTTAGCTAAAGCATTGAGCGAAGCAATGACTCACA
TTGGACATTGCAAATCTTGCCGAACTTTTACTGAAGAAGATGAGTGTGCTATCTGCCAAAACTACCGCCGCCAAATCAGC
GGACAACTTTGTGTGGTTGAAATGCCTGCAGATATTCAAGCGATTGAACAAACTGGGCAATTTTCAGGGCGTTATTTCGT
ATTAATGGGACATCTATCTCCTTTAGATGGAATAGGACCTCGTGAAATTGGTTTAGATTTATTACAGAAACGCTTAGAAG
AAGAATCTTTTCAAGAAGTGATTCTGGCAACCAATCCAACGATTGAGGGGGATGCGACCGCAAATTATATCGCTGAGATG
TGTTCTATTCACAATATTAAAGTTACTCGTATTGCACACGGTATTCCTGTCGGAAGTGAATTAGAAATGGTTGACGGAAC
AAGCCTTTCTCATTCATTTGTAGGAAGACGGGATATTTCTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
43.216 |
99.005 |
0.428 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
40.5 |
99.502 |
0.403 |