Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   ECTR2_RS10605 Genome accession   NC_017343
Coordinates   2115962..2116432 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus subsp. aureus ECT-R     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2110962..2121432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ECTR2_RS10585 (ECTR2_1986) coaW 2111270..2112073 (+) 804 WP_000862728.1 type II pantothenate kinase -
  ECTR2_RS10590 (ECTR2_1987) - 2112204..2112875 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  ECTR2_RS10595 (ECTR2_1988) ldmS 2113274..2114467 (-) 1194 WP_000183717.1 L-aspartate--L-methionine ligase LdmS -
  ECTR2_RS10600 (ECTR2_1989) - 2114467..2115651 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  ECTR2_RS10605 (ECTR2_1990) luxS 2115962..2116432 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  ECTR2_RS10610 (ECTR2_1991) - 2116584..2116934 (-) 351 WP_001024035.1 membrane protein -
  ECTR2_RS10615 (ECTR2_1992) - 2116948..2118249 (-) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  ECTR2_RS10625 (ECTR2_1993) deoC 2118528..2119190 (-) 663 WP_001083318.1 deoxyribose-phosphate aldolase -
  ECTR2_RS10630 (ECTR2_1994) deoD 2119504..2120214 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  ECTR2_RS10635 (ECTR2_1995) - 2120335..2120778 (-) 444 WP_000070866.1 Dps family protein -
  ECTR2_RS10640 (ECTR2_1996) - 2120978..2121391 (-) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=37223 ECTR2_RS10605 WP_000164421.1 2115962..2116432(+) (luxS) [Staphylococcus aureus subsp. aureus ECT-R]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=37223 ECTR2_RS10605 WP_000164421.1 2115962..2116432(+) (luxS) [Staphylococcus aureus subsp. aureus ECT-R]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment