Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   FNL90_RS09945 Genome accession   NZ_CP041408
Coordinates   54105..54200 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 37-97S     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49105..59200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL90_RS00320 (FNL90_00325) purK 49174..50247 (+) 1074 WP_047235088.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  FNL90_RS00325 (FNL90_00330) - 50249..51667 (+) 1419 WP_011888524.1 hypothetical protein -
  FNL90_RS00330 (FNL90_00335) purB 51687..52979 (+) 1293 WP_047235089.1 adenylosuccinate lyase -
  FNL90_RS00335 (FNL90_00340) comR 53110..54021 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  FNL90_RS09945 comS 54105..54200 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  FNL90_RS00340 (FNL90_00345) ruvB 54247..55245 (+) 999 WP_047235090.1 Holliday junction branch migration DNA helicase RuvB -
  FNL90_RS00345 (FNL90_00350) - 55383..55820 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  FNL90_RS00350 (FNL90_00355) - 55843..56244 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  FNL90_RS00355 (FNL90_00360) - 56241..58016 (+) 1776 WP_047235091.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=371909 FNL90_RS09945 WP_198462994.1 54105..54200(+) (comS) [Streptococcus pyogenes strain 37-97S]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=371909 FNL90_RS09945 WP_198462994.1 54105..54200(+) (comS) [Streptococcus pyogenes strain 37-97S]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment