Detailed information NTG0371819

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: G5C00_RS12725
• Genome accession: NZ_CP048934
• Coordinates: 2606944..2607927 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain 190693
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2601944..2612927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5C00_RS12700 (G5C00_12680)	-	2603092..2603199 (-)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-
G5C00_RS12705 (G5C00_12685)	-	2603575..2603682 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
G5C00_RS12710 (G5C00_12690)	-	2604059..2604166 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
G5C00_RS12715 (G5C00_12695)	yhjV	2604642..2605913 (+)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
G5C00_RS12720 (G5C00_12700)	dppF	2605943..2606947 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
G5C00_RS12725 (G5C00_12705)	amiE	2606944..2607927 (-)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
G5C00_RS12730 (G5C00_12710)	dppC	2607938..2608840 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
G5C00_RS12735 (G5C00_12715)	dppB	2608850..2609869 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
G5C00_RS12740 (G5C00_12720)	dppA	2610020..2611627 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=371819 G5C00_RS12725 WP_001196487.1 2606944..2607927(-) (amiE) [Escherichia coli strain 190693]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=371819 G5C00_RS12725 WP_001196487.1 2606944..2607927(-) (amiE) [Escherichia coli strain 190693]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407