Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FMO13_RS04710 Genome accession   NZ_CP041382
Coordinates   1121672..1122073 (-) Length   133 a.a.
NCBI ID   WP_209225531.1    Uniprot ID   -
Organism   Xanthomonas phaseoli pv. dieffenbachiae strain PL36     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1116672..1127073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FMO13_RS04695 (FMO13_04865) - 1118686..1120722 (-) 2037 WP_017155561.1 methyl-accepting chemotaxis protein -
  FMO13_RS04700 (FMO13_04870) - 1120762..1121292 (-) 531 WP_017158584.1 chemotaxis protein CheW -
  FMO13_RS04705 (FMO13_04875) - 1121292..1121654 (-) 363 WP_209225528.1 response regulator -
  FMO13_RS04710 (FMO13_04880) pilG 1121672..1122073 (-) 402 WP_209225531.1 response regulator Regulator
  FMO13_RS04715 (FMO13_04885) gshB 1122310..1123260 (+) 951 WP_209225533.1 glutathione synthase -
  FMO13_RS04720 (FMO13_04890) - 1123257..1124132 (+) 876 WP_209225536.1 cell envelope integrity protein TolA -
  FMO13_RS04725 (FMO13_04895) - 1124478..1125395 (-) 918 WP_209225538.1 ADP-ribosylglycohydrolase family protein -
  FMO13_RS04730 (FMO13_04900) tsaB 1125392..1126111 (-) 720 WP_057677682.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14647.98 Da        Isoelectric Point: 6.4637

>NTDB_id=371760 FMO13_RS04710 WP_209225531.1 1121672..1122073(-) (pilG) [Xanthomonas phaseoli pv. dieffenbachiae strain PL36]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTHEELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=371760 FMO13_RS04710 WP_209225531.1 1121672..1122073(-) (pilG) [Xanthomonas phaseoli pv. dieffenbachiae strain PL36]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCATGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment