Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FLK61_RS01845 Genome accession   NZ_CP041372
Coordinates   287730..288683 (-) Length   317 a.a.
NCBI ID   WP_176007850.1    Uniprot ID   A0A859FC52
Organism   Paenalkalicoccus suaedae strain M4U3P1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 282730..293683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FLK61_RS01815 (FLK61_23710) - 283421..283609 (-) 189 WP_176007844.1 hypothetical protein -
  FLK61_RS01820 (FLK61_23715) - 283723..283932 (+) 210 WP_176007845.1 hypothetical protein -
  FLK61_RS01825 (FLK61_23720) - 284292..284642 (+) 351 WP_176007846.1 hypothetical protein -
  FLK61_RS01830 (FLK61_23725) - 285018..286022 (-) 1005 WP_176007847.1 siderophore ABC transporter substrate-binding protein -
  FLK61_RS01835 (FLK61_23730) - 286044..286802 (-) 759 WP_176007848.1 ABC transporter ATP-binding protein -
  FLK61_RS01840 (FLK61_23735) - 286796..287740 (-) 945 WP_176007849.1 iron chelate uptake ABC transporter family permease subunit -
  FLK61_RS01845 (FLK61_23740) ceuB 287730..288683 (-) 954 WP_176007850.1 ABC transporter permease Machinery gene
  FLK61_RS01850 (FLK61_23745) - 289818..290600 (+) 783 WP_176007851.1 hypothetical protein -
  FLK61_RS01855 (FLK61_23750) - 290603..291838 (+) 1236 WP_176007852.1 glycosyltransferase -
  FLK61_RS01860 (FLK61_23755) - 291835..292797 (+) 963 WP_176007853.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34569.66 Da        Isoelectric Point: 9.8591

>NTDB_id=371676 FLK61_RS01845 WP_176007850.1 287730..288683(-) (ceuB) [Paenalkalicoccus suaedae strain M4U3P1]
MKLFLSLCGLLVLAFASLFVGVSSLSPADLFQLTEAQQQILWTSRVPRLLSILLAGVGMSIAGLIMQQLTQNKFVSPTTA
GTMDSARLGILISMIFFAGAHPLFRISLSMLFAIAGTLLFMQILNRIKMKDPIFIPLVGLMFGSIIGSITTFFAYQRDLI
QNMTAWLQGNFSTVITGSYEMLYLVLPLVILCYIFANRFTVAGMGEDFAKNLGVSYKTVVNTGLILVAVVTATVVLTVGM
IPFLGLVVPNLVTIFLGDNLKKNLPYTAIAGAVFVLICDIFGRLIIYPYEIPIGMTVGVIGSGLFLYLLLRRRQHAS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=371676 FLK61_RS01845 WP_176007850.1 287730..288683(-) (ceuB) [Paenalkalicoccus suaedae strain M4U3P1]
ATGAAGCTCTTTTTATCACTATGCGGGCTCCTGGTGCTGGCGTTTGCCTCGCTATTTGTGGGAGTGAGCAGCCTTTCGCC
GGCCGATTTATTCCAACTGACCGAAGCGCAACAACAAATCCTGTGGACGAGTCGAGTGCCTCGACTACTCTCGATTTTAC
TTGCCGGAGTTGGAATGAGCATCGCAGGTCTCATCATGCAACAGCTCACACAGAATAAGTTTGTTTCACCTACGACCGCT
GGGACGATGGACTCGGCTCGACTTGGAATTCTCATATCGATGATCTTTTTTGCTGGGGCGCATCCCCTCTTTCGCATCTC
CCTATCCATGCTGTTTGCTATTGCTGGAACGCTTTTGTTCATGCAAATTTTAAACAGGATAAAGATGAAGGATCCTATAT
TTATTCCTCTAGTTGGACTCATGTTTGGGAGCATTATTGGCTCTATCACAACCTTCTTCGCCTATCAGCGAGATCTCATT
CAAAATATGACTGCGTGGCTACAAGGTAACTTTTCCACGGTCATCACTGGCTCTTACGAAATGCTCTATCTTGTTTTGCC
GCTCGTGATTCTGTGCTACATATTTGCTAACCGGTTCACCGTGGCTGGGATGGGCGAGGATTTTGCCAAGAATCTTGGTG
TCTCCTATAAAACCGTCGTGAACACAGGGCTCATCTTAGTTGCAGTAGTAACAGCCACTGTCGTACTAACAGTCGGAATG
ATTCCATTTTTAGGTCTTGTTGTACCAAACCTTGTCACCATCTTTCTTGGAGACAATTTGAAGAAAAATTTGCCTTATAC
TGCTATAGCCGGAGCTGTTTTTGTTCTGATTTGTGATATTTTCGGTCGGCTCATTATTTATCCGTATGAAATTCCAATTG
GCATGACAGTCGGCGTCATAGGTAGTGGGTTATTTCTTTACTTACTGCTAAGGAGGCGACAGCATGCGAGCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859FC52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.723

96.845

0.53

Multiple sequence alignment