Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | LPA_RS13870 | Genome accession | NC_014125 |
| Coordinates | 3127765..3128832 (-) | Length | 355 a.a. |
| NCBI ID | WP_013101927.1 | Uniprot ID | - |
| Organism | Legionella pneumophila 2300/99 Alcoy | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3122765..3133832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPA_RS13845 (lpa_03897) | - | 3123056..3123772 (-) | 717 | WP_013101922.1 | dienelactone hydrolase family protein | - |
| LPA_RS13850 (lpa_03898) | - | 3124054..3124920 (+) | 867 | WP_013101923.1 | alpha/beta hydrolase | - |
| LPA_RS13855 (lpa_03899) | rpoH | 3125055..3125909 (-) | 855 | WP_013101924.1 | RNA polymerase sigma factor RpoH | - |
| LPA_RS13860 (lpa_03900) | ftsX | 3126205..3127134 (-) | 930 | WP_013101925.1 | permease-like cell division protein FtsX | - |
| LPA_RS13865 (lpa_03901) | ftsE | 3127128..3127778 (-) | 651 | WP_013101926.1 | cell division ATP-binding protein FtsE | - |
| LPA_RS13870 (lpa_03902) | pilA | 3127765..3128832 (-) | 1068 | WP_013101927.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| LPA_RS13875 (lpa_03903) | - | 3128895..3130220 (+) | 1326 | WP_013101928.1 | pitrilysin family protein | - |
| LPA_RS13880 (lpa_03904) | - | 3130217..3131521 (+) | 1305 | WP_013101929.1 | pitrilysin family protein | - |
| LPA_RS13885 (lpa_03905) | rsmD | 3131518..3132063 (+) | 546 | WP_013101930.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| LPA_RS13890 (lpa_03907) | dotD | 3132138..3132629 (+) | 492 | WP_014842716.1 | type IVB secretion system lipoprotein DotD | - |
| LPA_RS13895 (lpa_03908) | dotC | 3132610..3133521 (+) | 912 | WP_011216545.1 | type IVB secretion system protein DotC | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 39059.65 Da Isoelectric Point: 5.9087
>NTDB_id=37156 LPA_RS13870 WP_013101927.1 3127765..3128832(-) (pilA) [Legionella pneumophila 2300/99 Alcoy]
MIKWFKRNQNSEPNLDTEEQQDHAESSMESRLEEPKELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDILIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI
MIKWFKRNQNSEPNLDTEEQQDHAESSMESRLEEPKELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDILIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI
Nucleotide
Download Length: 1068 bp
>NTDB_id=37156 LPA_RS13870 WP_013101927.1 3127765..3128832(-) (pilA) [Legionella pneumophila 2300/99 Alcoy]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAACAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAGCCCAAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATTAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCAGACTCTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGTTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCTGCTGCGGTGGAGCAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATATTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAATGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAACAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAGCCCAAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATTAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCAGACTCTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGTTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCTGCTGCGGTGGAGCAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATATTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAATGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
56.811 |
84.789 |
0.482 |