Detailed information    

insolico Bioinformatically predicted

Overview

Name   lqsT   Type   Regulator
Locus tag   LPA_RS13060 Genome accession   NC_014125
Coordinates   2939642..2940904 (+) Length   420 a.a.
NCBI ID   WP_010948208.1    Uniprot ID   Q5ZSL1
Organism   Legionella pneumophila 2300/99 Alcoy     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 2934642..2945904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPA_RS13050 (lpa_03658) ceg32 2935516..2938344 (+) 2829 WP_011947425.1 Dot/Icm T4SS effector Ceg32/SidI -
  LPA_RS13055 (lpa_03659) mesI 2938346..2939236 (+) 891 WP_079995475.1 Dot/Icm T4SS effector metaeffector MesI -
  LPA_RS13060 (lpa_03661) lqsT 2939642..2940904 (+) 1263 WP_010948208.1 HAMP domain-containing sensor histidine kinase Regulator
  LPA_RS13065 (lpa_03662) - 2940952..2941647 (-) 696 WP_013101841.1 iron-containing redox enzyme family protein -
  LPA_RS13070 (lpa_03665) sdjA 2942044..2944466 (-) 2423 Protein_2581 Dot/Icm T4SS effector SdjA -
  LPA_RS13080 (lpa_03667) dupB 2944538..2945731 (-) 1194 WP_077383175.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 48657.07 Da        Isoelectric Point: 7.9744

>NTDB_id=37153 LPA_RS13060 WP_010948208.1 2939642..2940904(+) (lqsT) [Legionella pneumophila 2300/99 Alcoy]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALILLISGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=37153 LPA_RS13060 WP_010948208.1 2939642..2940904(+) (lqsT) [Legionella pneumophila 2300/99 Alcoy]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATATTTACTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTTCTCTTTTGTTTGCCTTACTTTTTTGCTTATTTGACTCTCATAAACAATGG
CTCGACTCTTTGGCTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTAGTTTCCAGTGTATTGGGGGCTCTTATAT
TACTTATATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCAGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCCTTGTTTGCACGAGATAGGGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACACCGCTTGCCAGTATTT
ATTTACAAGCAGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGCATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTATTCCATCAAAAAATTGCTCAAAGCGTCTTTAGAAGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAGTATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGAACTGGTTTAGGCTTGGCCTATTGTAAACTTCTGATGCAAGCAGCAGGTGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(310-417)

His Kinase A (phospho-acceptor) domain (HisKA)

(198-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZSL1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

100

100

1

Multiple sequence alignment