Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FLP15_RS06120 | Genome accession | NZ_CP041356 |
| Coordinates | 1218349..1220799 (+) | Length | 816 a.a. |
| NCBI ID | WP_142767445.1 | Uniprot ID | A0A514ZBK1 |
| Organism | Lactococcus protaetiae strain KACC 19320 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1213349..1225799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FLP15_RS06100 (FLP15_06100) | rpoE | 1213819..1214379 (+) | 561 | WP_142766391.1 | DNA-directed RNA polymerase subunit delta | - |
| FLP15_RS06105 (FLP15_06105) | mltG | 1214898..1216511 (+) | 1614 | WP_142766392.1 | endolytic transglycosylase MltG | - |
| FLP15_RS06110 (FLP15_06110) | greA | 1216616..1217086 (+) | 471 | WP_120771105.1 | transcription elongation factor GreA | - |
| FLP15_RS06115 (FLP15_06115) | - | 1217907..1218359 (+) | 453 | WP_120773240.1 | CtsR family transcriptional regulator | - |
| FLP15_RS06120 (FLP15_06120) | clpC | 1218349..1220799 (+) | 2451 | WP_142767445.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| FLP15_RS06125 (FLP15_06125) | raiA | 1220947..1221504 (+) | 558 | WP_142766393.1 | ribosome-associated translation inhibitor RaiA | - |
| FLP15_RS06130 (FLP15_06130) | eno | 1221749..1223050 (+) | 1302 | WP_142766394.1 | phosphopyruvate hydratase | - |
| FLP15_RS13715 | - | 1223487..1223710 (-) | 224 | Protein_1193 | acetate--CoA ligase | - |
| FLP15_RS06135 (FLP15_06135) | - | 1223910..1224827 (+) | 918 | WP_190288361.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90241.83 Da Isoelectric Point: 6.8409
>NTDB_id=371497 FLP15_RS06120 WP_142767445.1 1218349..1220799(+) (clpC) [Lactococcus protaetiae strain KACC 19320]
MKFENIEYTTTVEQILDKAAEYAYYYQYGAIESAHILAAMTTTAGSIAFSVLAGMKVDSSDLLIDVEDLSSHVVVKRENL
RFSPRAEEIIQLAGLLAIHNGAKVVGTEHLLYALLQVEDGFALQLLKLQKVNIVSVRKELEKRTGLKIPEARKTVTPMSK
RNLAKRVSATTTTPTLDSVSSDLTESAREGKLDPMIGREAEVERLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVA
GDVPVGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSSDPDVIIFIDELHTIIGAGGGMDSVNDAANILKPALAR
GDFQMIGATTYHEYQKYIEKDEALERRLARINVEEPTVDEAIAILQGLKEKFEDYHKVAFTDEAIKSAVTLSVRYMTNRK
LPDKAIDLLDEAAASVKISVKNQQTKRLELEKELTEAKKELADSVIQLDVKSSREKEKVVQKIADKINKFSVSTDKKQEV
TDKAVIAVASTLTGVPITQMTKSESERLIKLEQELHKRVVGQEEAISAVSRAIRRARSGVSDSRRPMGSFMFLGPTGVGK
TELAKALADSVFGSEDSMIRVDMSEYMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVILLDEVEKAHPDVFNIML
QILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKDISADYKAMKARILEELKRHYRPEFLNRIDETIVF
HSLATHEIEQIVKIMSKSLIKRLSEQKVHIKLTSAAAKLIAEVGFDPEYGARPLRKALQREVEDVLSEQLLTGEIKAGDS
ISIGAANKKIKITHII
MKFENIEYTTTVEQILDKAAEYAYYYQYGAIESAHILAAMTTTAGSIAFSVLAGMKVDSSDLLIDVEDLSSHVVVKRENL
RFSPRAEEIIQLAGLLAIHNGAKVVGTEHLLYALLQVEDGFALQLLKLQKVNIVSVRKELEKRTGLKIPEARKTVTPMSK
RNLAKRVSATTTTPTLDSVSSDLTESAREGKLDPMIGREAEVERLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVA
GDVPVGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSSDPDVIIFIDELHTIIGAGGGMDSVNDAANILKPALAR
GDFQMIGATTYHEYQKYIEKDEALERRLARINVEEPTVDEAIAILQGLKEKFEDYHKVAFTDEAIKSAVTLSVRYMTNRK
LPDKAIDLLDEAAASVKISVKNQQTKRLELEKELTEAKKELADSVIQLDVKSSREKEKVVQKIADKINKFSVSTDKKQEV
TDKAVIAVASTLTGVPITQMTKSESERLIKLEQELHKRVVGQEEAISAVSRAIRRARSGVSDSRRPMGSFMFLGPTGVGK
TELAKALADSVFGSEDSMIRVDMSEYMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVILLDEVEKAHPDVFNIML
QILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKDISADYKAMKARILEELKRHYRPEFLNRIDETIVF
HSLATHEIEQIVKIMSKSLIKRLSEQKVHIKLTSAAAKLIAEVGFDPEYGARPLRKALQREVEDVLSEQLLTGEIKAGDS
ISIGAANKKIKITHII
Nucleotide
Download Length: 2451 bp
>NTDB_id=371497 FLP15_RS06120 WP_142767445.1 1218349..1220799(+) (clpC) [Lactococcus protaetiae strain KACC 19320]
ATGAAATTTGAAAATATAGAATACACAACTACAGTAGAGCAAATCCTTGATAAGGCGGCAGAATATGCCTACTATTATCA
GTATGGTGCAATTGAAAGTGCTCATATTTTAGCAGCAATGACAACTACTGCTGGCTCAATTGCTTTTAGCGTACTTGCCG
GAATGAAAGTTGATTCCTCAGATTTATTGATTGATGTGGAAGATTTATCCAGCCATGTTGTTGTTAAACGTGAAAATCTA
AGATTTTCTCCTAGAGCAGAAGAAATCATTCAATTGGCGGGACTTTTAGCGATACACAATGGAGCTAAGGTTGTAGGCAC
AGAACATCTTCTTTATGCTCTTTTACAAGTTGAAGATGGTTTTGCATTGCAACTGTTGAAATTGCAAAAAGTGAATATCG
TTTCTGTCCGAAAAGAGCTAGAAAAACGAACGGGTCTAAAGATACCTGAAGCTAGAAAAACAGTCACACCAATGTCTAAA
AGAAACCTTGCTAAACGAGTTTCAGCAACAACCACAACGCCAACTCTGGACTCAGTTTCTTCTGATTTGACAGAATCTGC
ACGTGAAGGAAAGCTTGATCCAATGATTGGTCGTGAGGCTGAAGTTGAACGTTTGATTCATATATTAAGCCGACGAACGA
AAAATAATCCTGTGCTTGTTGGAGAACCTGGTGTAGGTAAATCAGCGATTATTGAAGGTTTGGCTCAACGTATTGTGGCA
GGAGATGTTCCTGTTGGTCTGATGAATAGTCGAATCATGGCATTAAATATGGCGACTGTTGTTGCTGGTACAAAATTTCG
AGGAGAATTTGAGGACCGCTTGACAGCAATCGTAGAAGAAGTAAGTAGTGACCCAGATGTCATTATTTTCATTGACGAAC
TTCATACGATTATCGGTGCAGGTGGTGGCATGGATTCGGTCAATGATGCTGCAAATATTTTGAAACCAGCACTTGCGCGA
GGTGATTTTCAAATGATAGGAGCAACAACTTATCATGAATATCAAAAATATATTGAAAAAGATGAGGCATTGGAGCGACG
CCTTGCTAGGATAAATGTTGAAGAACCAACAGTTGACGAAGCTATTGCCATTCTTCAAGGCTTGAAAGAAAAATTTGAAG
ATTACCATAAGGTTGCCTTTACTGACGAAGCCATCAAAAGTGCTGTGACTTTGAGCGTTCGTTATATGACAAATCGAAAA
TTACCTGATAAAGCTATTGACTTACTCGATGAAGCAGCAGCATCAGTAAAAATTTCTGTAAAAAACCAACAAACAAAACG
ATTAGAACTCGAAAAAGAACTGACAGAAGCCAAAAAAGAATTAGCAGACTCAGTCATTCAACTTGATGTGAAATCATCAC
GAGAAAAAGAAAAAGTTGTTCAAAAGATTGCTGATAAGATTAATAAATTTTCTGTCAGCACTGACAAAAAACAAGAAGTC
ACTGACAAAGCTGTCATTGCTGTTGCATCAACGCTGACAGGAGTTCCAATCACTCAAATGACAAAATCTGAAAGTGAACG
CCTGATTAAACTTGAGCAAGAACTTCATAAACGAGTTGTTGGACAAGAAGAAGCGATTTCAGCAGTATCACGAGCCATTA
GACGAGCGAGATCGGGTGTCTCAGACAGCCGAAGACCAATGGGTTCCTTTATGTTTCTCGGCCCAACAGGTGTTGGTAAG
ACAGAACTTGCAAAAGCGTTAGCTGACAGTGTCTTTGGAAGTGAGGATAGCATGATTCGCGTGGATATGAGCGAATACAT
GGAAAAACATTCAACTTCTCGTTTGATTGGAGCACCTCCAGGATATGTTGGATATGATGAAGGTGGGCAACTAACAGAGC
GTGTCCGTAATAAACCATACTCTGTGATTTTACTTGATGAGGTTGAAAAAGCCCATCCAGATGTCTTCAATATCATGCTA
CAAATTCTTGATGATGGATTTGTCACAGATACAAAAGGAAGAAAAGTTGATTTTAGAAATACAATTATCATCATGACTTC
AAACCTTGGAGCGACAGCATTACGTGACGATAAAACCGTTGGATTTGGAGCGAAAGATATCTCCGCTGATTATAAAGCAA
TGAAAGCACGGATTCTTGAAGAATTGAAACGTCACTATCGTCCGGAATTTCTCAATCGAATTGATGAAACAATCGTCTTC
CACTCACTTGCTACCCATGAAATTGAACAGATCGTAAAAATTATGAGTAAATCTCTCATCAAACGACTGTCAGAGCAAAA
AGTTCACATTAAACTCACATCAGCAGCAGCAAAACTGATTGCAGAAGTTGGCTTTGACCCTGAATATGGGGCTCGTCCGT
TGCGTAAAGCGCTCCAACGTGAGGTAGAAGATGTTTTGAGCGAACAACTCCTGACAGGAGAAATTAAGGCTGGTGATAGT
ATTTCTATCGGTGCAGCTAATAAAAAGATTAAAATCACTCATATTATTTGA
ATGAAATTTGAAAATATAGAATACACAACTACAGTAGAGCAAATCCTTGATAAGGCGGCAGAATATGCCTACTATTATCA
GTATGGTGCAATTGAAAGTGCTCATATTTTAGCAGCAATGACAACTACTGCTGGCTCAATTGCTTTTAGCGTACTTGCCG
GAATGAAAGTTGATTCCTCAGATTTATTGATTGATGTGGAAGATTTATCCAGCCATGTTGTTGTTAAACGTGAAAATCTA
AGATTTTCTCCTAGAGCAGAAGAAATCATTCAATTGGCGGGACTTTTAGCGATACACAATGGAGCTAAGGTTGTAGGCAC
AGAACATCTTCTTTATGCTCTTTTACAAGTTGAAGATGGTTTTGCATTGCAACTGTTGAAATTGCAAAAAGTGAATATCG
TTTCTGTCCGAAAAGAGCTAGAAAAACGAACGGGTCTAAAGATACCTGAAGCTAGAAAAACAGTCACACCAATGTCTAAA
AGAAACCTTGCTAAACGAGTTTCAGCAACAACCACAACGCCAACTCTGGACTCAGTTTCTTCTGATTTGACAGAATCTGC
ACGTGAAGGAAAGCTTGATCCAATGATTGGTCGTGAGGCTGAAGTTGAACGTTTGATTCATATATTAAGCCGACGAACGA
AAAATAATCCTGTGCTTGTTGGAGAACCTGGTGTAGGTAAATCAGCGATTATTGAAGGTTTGGCTCAACGTATTGTGGCA
GGAGATGTTCCTGTTGGTCTGATGAATAGTCGAATCATGGCATTAAATATGGCGACTGTTGTTGCTGGTACAAAATTTCG
AGGAGAATTTGAGGACCGCTTGACAGCAATCGTAGAAGAAGTAAGTAGTGACCCAGATGTCATTATTTTCATTGACGAAC
TTCATACGATTATCGGTGCAGGTGGTGGCATGGATTCGGTCAATGATGCTGCAAATATTTTGAAACCAGCACTTGCGCGA
GGTGATTTTCAAATGATAGGAGCAACAACTTATCATGAATATCAAAAATATATTGAAAAAGATGAGGCATTGGAGCGACG
CCTTGCTAGGATAAATGTTGAAGAACCAACAGTTGACGAAGCTATTGCCATTCTTCAAGGCTTGAAAGAAAAATTTGAAG
ATTACCATAAGGTTGCCTTTACTGACGAAGCCATCAAAAGTGCTGTGACTTTGAGCGTTCGTTATATGACAAATCGAAAA
TTACCTGATAAAGCTATTGACTTACTCGATGAAGCAGCAGCATCAGTAAAAATTTCTGTAAAAAACCAACAAACAAAACG
ATTAGAACTCGAAAAAGAACTGACAGAAGCCAAAAAAGAATTAGCAGACTCAGTCATTCAACTTGATGTGAAATCATCAC
GAGAAAAAGAAAAAGTTGTTCAAAAGATTGCTGATAAGATTAATAAATTTTCTGTCAGCACTGACAAAAAACAAGAAGTC
ACTGACAAAGCTGTCATTGCTGTTGCATCAACGCTGACAGGAGTTCCAATCACTCAAATGACAAAATCTGAAAGTGAACG
CCTGATTAAACTTGAGCAAGAACTTCATAAACGAGTTGTTGGACAAGAAGAAGCGATTTCAGCAGTATCACGAGCCATTA
GACGAGCGAGATCGGGTGTCTCAGACAGCCGAAGACCAATGGGTTCCTTTATGTTTCTCGGCCCAACAGGTGTTGGTAAG
ACAGAACTTGCAAAAGCGTTAGCTGACAGTGTCTTTGGAAGTGAGGATAGCATGATTCGCGTGGATATGAGCGAATACAT
GGAAAAACATTCAACTTCTCGTTTGATTGGAGCACCTCCAGGATATGTTGGATATGATGAAGGTGGGCAACTAACAGAGC
GTGTCCGTAATAAACCATACTCTGTGATTTTACTTGATGAGGTTGAAAAAGCCCATCCAGATGTCTTCAATATCATGCTA
CAAATTCTTGATGATGGATTTGTCACAGATACAAAAGGAAGAAAAGTTGATTTTAGAAATACAATTATCATCATGACTTC
AAACCTTGGAGCGACAGCATTACGTGACGATAAAACCGTTGGATTTGGAGCGAAAGATATCTCCGCTGATTATAAAGCAA
TGAAAGCACGGATTCTTGAAGAATTGAAACGTCACTATCGTCCGGAATTTCTCAATCGAATTGATGAAACAATCGTCTTC
CACTCACTTGCTACCCATGAAATTGAACAGATCGTAAAAATTATGAGTAAATCTCTCATCAAACGACTGTCAGAGCAAAA
AGTTCACATTAAACTCACATCAGCAGCAGCAAAACTGATTGCAGAAGTTGGCTTTGACCCTGAATATGGGGCTCGTCCGT
TGCGTAAAGCGCTCCAACGTGAGGTAGAAGATGTTTTGAGCGAACAACTCCTGACAGGAGAAATTAAGGCTGGTGATAGT
ATTTCTATCGGTGCAGCTAATAAAAAGATTAAAATCACTCATATTATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.152 |
100 |
0.862 |
| clpC | Streptococcus thermophilus LMG 18311 |
49.7 |
100 |
0.507 |
| clpC | Streptococcus thermophilus LMD-9 |
49.7 |
100 |
0.507 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.559 |
98.652 |
0.499 |
| clpC | Streptococcus pneumoniae Rx1 |
49.091 |
100 |
0.496 |
| clpC | Streptococcus pneumoniae D39 |
49.091 |
100 |
0.496 |
| clpC | Streptococcus pneumoniae TIGR4 |
49.091 |
100 |
0.496 |
| clpC | Streptococcus mutans UA159 |
47.236 |
100 |
0.482 |
| clpE | Streptococcus mutans UA159 |
47.231 |
79.657 |
0.376 |
| clpE | Streptococcus pneumoniae Rx1 |
47.656 |
78.431 |
0.374 |
| clpE | Streptococcus pneumoniae D39 |
47.656 |
78.431 |
0.374 |
| clpE | Streptococcus pneumoniae R6 |
47.656 |
78.431 |
0.374 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.5 |
78.431 |
0.373 |