Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   HMPREF0772_RS13300 Genome accession   NC_017342
Coordinates   2642278..2642952 (-) Length   224 a.a.
NCBI ID   WP_001166499.1    Uniprot ID   Q6GJ11
Organism   Staphylococcus aureus subsp. aureus TCH60     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2637278..2647952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF0772_RS13285 (HMPREF0772_12526) - 2638458..2640347 (-) 1890 WP_000009408.1 FtsX-like permease family protein -
  HMPREF0772_RS13290 (HMPREF0772_12527) vraF 2640337..2641098 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  HMPREF0772_RS13295 (HMPREF0772_12528) graS 2641245..2642285 (-) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  HMPREF0772_RS13300 (HMPREF0772_12529) braR 2642278..2642952 (-) 675 WP_001166499.1 response regulator transcription factor GraR/ApsR Regulator
  HMPREF0772_RS13305 (HMPREF0772_12530) graX 2642968..2643891 (-) 924 WP_000802949.1 auxiliary protein GraX/ApsX -
  HMPREF0772_RS13310 (HMPREF0772_12531) - 2644004..2644510 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  HMPREF0772_RS13315 (HMPREF0772_12532) - 2644708..2645136 (-) 429 WP_000198502.1 hypothetical protein -
  HMPREF0772_RS13325 (HMPREF0772_12533) - 2645465..2646508 (-) 1044 WP_001030763.1 alpha/beta hydrolase -
  HMPREF0772_RS13330 (HMPREF0772_12534) - 2646659..2647726 (-) 1068 WP_000980141.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.3968

>NTDB_id=37138 HMPREF0772_RS13300 WP_001166499.1 2642278..2642952(-) (braR) [Staphylococcus aureus subsp. aureus TCH60]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=37138 HMPREF0772_RS13300 WP_001166499.1 2642278..2642952(-) (braR) [Staphylococcus aureus subsp. aureus TCH60]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CTGTCATTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATTTTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGGGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6GJ11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406

Multiple sequence alignment