Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   FI644_RS00590 Genome accession   NZ_CP041305
Coordinates   108716..109675 (-) Length   319 a.a.
NCBI ID   WP_053475239.1    Uniprot ID   A0A0Q3T5B0
Organism   Cytobacillus solani strain 5L6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 103716..114675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FI644_RS00565 - 104370..105149 (-) 780 WP_075209114.1 DUF2268 domain-containing protein -
  FI644_RS00570 fabF 105491..106729 (-) 1239 WP_053475243.1 beta-ketoacyl-ACP synthase II -
  FI644_RS00575 - 106796..107728 (-) 933 WP_053475242.1 beta-ketoacyl-ACP synthase III -
  FI644_RS00580 - 107963..108304 (+) 342 WP_142107858.1 hypothetical protein -
  FI644_RS00585 comZ 108499..108693 (-) 195 WP_053475240.1 ComZ family protein Regulator
  FI644_RS00590 med 108716..109675 (-) 960 WP_053475239.1 BMP family ABC transporter substrate-binding protein Regulator
  FI644_RS00595 - 109808..110308 (-) 501 WP_053475238.1 hypothetical protein -
  FI644_RS00600 - 110389..111132 (-) 744 WP_053475237.1 hydrolase -
  FI644_RS00605 - 111347..111538 (+) 192 WP_053475236.1 DUF2929 family protein -
  FI644_RS00610 clpB 111767..114373 (-) 2607 WP_053475235.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35744.53 Da        Isoelectric Point: 5.2258

>NTDB_id=371134 FI644_RS00590 WP_053475239.1 108716..109675(-) (med) [Cytobacillus solani strain 5L6]
MHKLIMRFGMIFLCLLLLASCGQAMSAGNLKKAGLLVPDTVNDQVWGTKGYKGMLKIQSHHNIEVYYKEGMNSQMVVERA
VKEFDQKGVNIIFGHGNEYSEYFNKISNKYPHIHFVSFNGDAENSNTTSLNFEAYAMGFFGGMIAGHMTKTDTIGIIAAY
EWQPEIEGFYEGANYENENVKVIIEYVGNWDDGTQAIQSLDRIFAKNADVIYPAGDGYNVPVIEKVKEKGHYAIGYISDQ
SDLGESAVLTSTIQHVDVLYELVAKKFNEGKLKSGNLSFDFQDDVITLGKFSPNVDKEYIELINAAIEKYKKTGRLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=371134 FI644_RS00590 WP_053475239.1 108716..109675(-) (med) [Cytobacillus solani strain 5L6]
ATGCATAAATTGATAATGCGTTTTGGGATGATCTTTTTATGCCTTCTTTTATTAGCCTCTTGTGGACAAGCAATGTCTGC
AGGAAATCTTAAGAAAGCTGGCTTGTTAGTCCCGGATACAGTAAATGATCAAGTTTGGGGTACAAAAGGCTATAAAGGAA
TGCTAAAGATACAGTCCCATCATAATATAGAAGTTTACTATAAAGAGGGCATGAACTCCCAAATGGTTGTGGAACGTGCG
GTTAAAGAATTTGATCAAAAAGGGGTAAATATAATTTTTGGTCATGGAAATGAGTATTCGGAGTATTTCAACAAAATATC
GAACAAATATCCACATATCCATTTTGTGAGTTTTAATGGTGACGCTGAAAATTCTAACACAACAAGCTTAAATTTCGAAG
CTTATGCGATGGGGTTTTTCGGAGGAATGATTGCCGGGCATATGACAAAAACGGATACAATTGGAATAATTGCCGCATAC
GAGTGGCAACCTGAAATCGAAGGCTTCTATGAGGGTGCAAATTATGAAAATGAAAATGTCAAAGTAATTATTGAATATGT
TGGCAACTGGGATGATGGCACGCAAGCAATTCAAAGCTTGGATAGGATTTTTGCCAAGAATGCAGATGTTATATACCCTG
CAGGAGATGGATATAATGTTCCAGTCATTGAAAAGGTGAAAGAAAAAGGGCATTATGCAATTGGATATATTTCAGATCAG
TCTGACCTGGGTGAATCAGCAGTGTTAACAAGTACCATTCAGCATGTTGATGTACTCTATGAATTAGTCGCTAAAAAGTT
CAATGAAGGGAAGCTGAAATCAGGAAACCTTTCTTTTGATTTTCAAGATGACGTAATTACATTAGGTAAGTTTAGCCCTA
ATGTTGACAAAGAATATATTGAGTTAATTAATGCCGCAATTGAAAAGTATAAGAAAACTGGAAGATTGCCTAATGAATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Q3T5B0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

50.637

98.433

0.498

Multiple sequence alignment