Detailed information NTG0371046

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FK538_RS07365
• Genome accession: NZ_CP041295
• Coordinates: 1520561..1521754 (-)
• Length: 397 a.a.
• NCBI ID: WP_168370841.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain 80-1-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1515561..1526754

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FK538_RS07345 (FK538_07360)	-	1517040..1517489 (+)	450	WP_168370523.1	MaoC family dehydratase	-
FK538_RS07350 (FK538_07365)	-	1517593..1518621 (+)	1029	WP_005178175.1	helix-turn-helix transcriptional regulator	-
FK538_RS07355 (FK538_07370)	gcvH	1518690..1519064 (+)	375	WP_005178176.1	glycine cleavage system protein GcvH	-
FK538_RS07360 (FK538_07375)	-	1519320..1520501 (+)	1182	WP_168370524.1	MFS transporter	-
FK538_RS07365 (FK538_07380)	pilU	1520561..1521754 (-)	1194	WP_168370841.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FK538_RS07370 (FK538_07385)	-	1522008..1523063 (-)	1056	WP_104488899.1	3-deoxy-7-phosphoheptulonate synthase	-
FK538_RS07375 (FK538_07390)	hppD	1523938..1524996 (+)	1059	WP_016658083.1	4-hydroxyphenylpyruvate dioxygenase	-
FK538_RS07380 (FK538_07395)	-	1525148..1526530 (+)	1383	WP_168370525.1	amino acid permease	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 44697.19 Da
• Isoelectric Point: 6.4541

>NTDB_id=371046 FK538_RS07365 WP_168370841.1 1520561..1521754(-) (pilU) [Acinetobacter indicus strain 80-1-2]
MYSAELLEDARKFMFHMLSKVVEFGGSDLFITADFPPSIKHQGMMKALGQQALTAEKTKLFAYSLMNEKQRSEFETDLKC
NFAISVPEVSRFRVNVFQQQLHVGMVIRTISAEIPNFSQLKLPESLKHIIMEKRGLVLVVGGTGSGKSTSLAAMIDHRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLVRTEDGKGRRAAVEIMLNTPLISELILKGQFHELKSIMGKS
RELGMQTFDQALFDLYNEGAISYEEAIRNADSMNELRLQIKLKSNRPSEASAAMIFSMLEEPKPEDEDTESAPQQSA

Nucleotide

• Length: 1194 bp

>NTDB_id=371046 FK538_RS07365 WP_168370841.1 1520561..1521754(-) (pilU) [Acinetobacter indicus strain 80-1-2]
ATGTACAGTGCAGAATTACTCGAAGATGCGCGTAAATTTATGTTTCATATGCTCAGCAAAGTGGTTGAGTTTGGGGGATC
AGATTTATTTATTACCGCGGATTTTCCACCGAGCATTAAACATCAGGGCATGATGAAAGCGCTGGGACAACAGGCGCTGA
CTGCAGAAAAAACCAAGCTGTTTGCCTACAGCCTCATGAATGAAAAACAGCGTAGCGAGTTTGAAACTGATCTGAAATGC
AACTTTGCCATTAGTGTGCCGGAGGTATCGCGTTTTCGGGTCAATGTGTTTCAACAGCAGCTGCATGTCGGGATGGTGAT
TCGAACCATTAGCGCGGAAATTCCAAACTTTAGCCAGCTGAAACTGCCGGAATCGCTGAAGCATATTATTATGGAAAAGC
GCGGTCTGGTGCTGGTGGTGGGGGGAACCGGTTCAGGTAAATCGACCTCTTTGGCGGCGATGATTGATCATCGTAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGACCCGGTGGAATATGTGCACAAGCATAAGAAGTCAATGATTACCCATCG
TGAAGTCGGGGTCGACAGCCATTCCTGGCACAATGCGCTGAAAAATACCTTACGTCAGGCACCGGATGTGATTTTAATTG
GCGAGATCCGCGACACCGAAACCATGGAACATGCGATTGCCTTTGCTGAAACCGGGCATTTATGTTTGGGCACCTTGCAT
GCCAATAACGCCAACCAGACGCTGGACCGGATTATCAACTTTTTCCCGGAAGAACGCCGTAACCAGCTGCTGATGGACCT
GTCGTCTAATATGAAGGCCATTATTTCCCAGCGTCTGGTGCGTACCGAAGATGGTAAAGGCCGCCGTGCGGCAGTCGAGA
TTATGCTGAATACGCCGCTGATTTCTGAACTGATTTTAAAAGGCCAGTTCCATGAGTTAAAGTCGATTATGGGCAAATCG
CGTGAACTGGGCATGCAGACGTTTGATCAGGCCCTATTTGATTTGTATAACGAAGGTGCAATTTCCTATGAAGAAGCAAT
TCGTAATGCCGACTCGATGAATGAATTGCGCTTACAGATCAAGCTGAAAAGTAACCGGCCAAGCGAAGCTTCGGCAGCTA
TGATCTTTAGCATGCTGGAAGAACCAAAACCGGAAGATGAAGATACGGAATCTGCTCCTCAACAGAGTGCTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.207	88.917	0.526
pilU	Acinetobacter baylyi ADP1	54.802	89.169	0.489
pilU	Vibrio cholerae strain A1552	52.367	85.139	0.446
pilT	Acinetobacter nosocomialis M2	43.636	83.123	0.363
pilT	Acinetobacter baumannii D1279779	43.636	83.123	0.363
pilT	Acinetobacter baumannii strain A118	43.636	83.123	0.363