Detailed information NTG0371044

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FK538_RS06200
• Genome accession: NZ_CP041295
• Coordinates: 1282898..1283533 (+)
• Length: 211 a.a.
• NCBI ID: WP_104489735.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain 80-1-2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1277898..1288533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FK538_RS06165 (FK538_06180)	kdsB	1278249..1279013 (+)	765	WP_075174513.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FK538_RS06170 (FK538_06185)	-	1279022..1280005 (+)	984	WP_045795758.1	DNA polymerase III subunit delta'	-
FK538_RS06175 (FK538_06190)	-	1280017..1280358 (+)	342	WP_005177501.1	PilZ domain-containing protein	-
FK538_RS06180 (FK538_06195)	-	1280388..1281161 (+)	774	WP_005177502.1	TatD family hydrolase	-
FK538_RS06185 (FK538_06200)	-	1281222..1281836 (+)	615	WP_075166784.1	TetR/AcrR family transcriptional regulator	-
FK538_RS06190 (FK538_06205)	-	1281842..1282414 (+)	573	WP_075174514.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
FK538_RS06195 (FK538_06210)	xcpV	1282557..1282901 (+)	345	WP_242898261.1	type II secretion system protein	Machinery gene
FK538_RS06200 (FK538_06215)	xcpW	1282898..1283533 (+)	636	WP_104489735.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FK538_RS06205 (FK538_06220)	gspK	1283566..1284513 (+)	948	WP_104487765.1	type II secretion system minor pseudopilin GspK	-
FK538_RS06210 (FK538_06225)	-	1284662..1285258 (+)	597	WP_005177512.1	6-pyruvoyl trahydropterin synthase family protein	-
FK538_RS06215 (FK538_06230)	ung	1285300..1286013 (+)	714	WP_005177514.1	uracil-DNA glycosylase	-
FK538_RS06220 (FK538_06235)	-	1286010..1287134 (+)	1125	WP_005177517.1	enoyl-CoA hydratase/isomerase family protein	-
FK538_RS06225 (FK538_06240)	tadA	1287138..1287659 (+)	522	WP_075166790.1	tRNA adenosine(34) deaminase TadA	-
FK538_RS06230 (FK538_06245)	-	1287717..1288148 (+)	432	WP_104473640.1	SRPBCC family protein	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 24193.50 Da
• Isoelectric Point: 6.4849

>NTDB_id=371044 FK538_RS06200 WP_104489735.1 1282898..1283533(+) (xcpW) [Acinetobacter indicus strain 80-1-2]
MIKAKRGFTLVELLVAIAIFAVLSALGWKVFDYLVKVKDRNQWHEQQLEGLQSAYQQILRDSIQIVPLTANINNDIQPAL
VLQNGRFNFSKTGVTDPLQQGIAPTERIEYQYRADEQKLYRLKYANLHQSGQDQPVSSVLLDNVSQFQVSVLNPQELSNW
PDSSIDLNDDQQKRKLPKGIKINLTVQDIQYEWIFSLLNTDFLKSDNKTTS

Nucleotide

• Length: 636 bp

>NTDB_id=371044 FK538_RS06200 WP_104489735.1 1282898..1283533(+) (xcpW) [Acinetobacter indicus strain 80-1-2]
ATGATTAAGGCTAAACGCGGATTTACCTTGGTTGAACTGCTGGTGGCCATTGCCATCTTTGCGGTGCTGTCTGCCTTGGG
CTGGAAAGTATTTGATTATCTGGTCAAGGTCAAAGACCGTAACCAGTGGCATGAACAGCAGTTAGAAGGACTGCAGAGTG
CCTATCAACAAATCTTGCGTGACAGTATCCAGATTGTACCGCTGACCGCAAACATCAATAATGATATTCAGCCAGCTCTG
GTACTACAAAACGGCCGTTTTAATTTTAGCAAGACCGGTGTGACCGATCCTTTGCAGCAGGGCATTGCGCCCACTGAACG
GATTGAATATCAGTACCGGGCCGATGAACAAAAACTGTATCGTCTGAAATATGCCAATTTGCATCAGTCCGGGCAGGATC
AGCCGGTTTCCAGTGTATTGTTGGACAATGTTAGCCAGTTTCAGGTCAGTGTGCTGAATCCGCAAGAGCTGAGTAACTGG
CCAGACAGCAGTATTGATTTAAATGATGATCAGCAAAAACGCAAACTGCCAAAAGGCATTAAAATAAATTTAACCGTACA
AGATATACAATATGAATGGATTTTTAGCCTGTTAAATACTGACTTCCTGAAATCAGACAATAAAACCACATCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (3-26)

• Type II secretion system (T2SS), protein J (T2SSJ) (60-194)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.224	92.891	0.569