Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   FK537_RS05525 Genome accession   NZ_CP041291
Coordinates   1068084..1068962 (-) Length   292 a.a.
NCBI ID   WP_005182159.1    Uniprot ID   N9KSY6
Organism   Acinetobacter indicus strain 94-2     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1063084..1073962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FK537_RS05505 (FK537_05550) miaB 1064636..1066090 (+) 1455 WP_005182171.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  FK537_RS05510 (FK537_05555) - 1066132..1067205 (+) 1074 WP_016659561.1 PhoH family protein -
  FK537_RS05515 (FK537_05560) ybeY 1067225..1067707 (+) 483 WP_075168291.1 rRNA maturation RNase YbeY -
  FK537_RS05520 (FK537_05565) - 1067797..1068087 (+) 291 WP_075168292.1 antibiotic biosynthesis monooxygenase family protein -
  FK537_RS05525 (FK537_05570) tonB2 1068084..1068962 (-) 879 WP_005182159.1 energy transducer TonB Machinery gene
  FK537_RS05530 (FK537_05575) - 1069202..1069885 (+) 684 WP_075168293.1 hypothetical protein -
  FK537_RS05535 (FK537_05580) - 1070038..1070751 (+) 714 WP_005182145.1 DUF3108 domain-containing protein -
  FK537_RS05540 (FK537_05585) - 1070841..1071416 (+) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  FK537_RS05545 (FK537_05590) - 1071634..1072014 (+) 381 WP_075168294.1 hypothetical protein -
  FK537_RS05550 - 1072072..1072248 (-) 177 WP_158649863.1 hypothetical protein -
  FK537_RS05555 (FK537_05595) - 1072434..1073075 (+) 642 WP_168369730.1 hypothetical protein -
  FK537_RS05560 (FK537_05600) - 1073075..1073674 (+) 600 WP_016659757.1 IS607 family transposase -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33024.72 Da        Isoelectric Point: 9.1867

>NTDB_id=370990 FK537_RS05525 WP_005182159.1 1068084..1068962(-) (tonB2) [Acinetobacter indicus strain 94-2]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHAMLDEAAKASVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=370990 FK537_RS05525 WP_005182159.1 1068084..1068962(-) (tonB2) [Acinetobacter indicus strain 94-2]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTGACGCTGGC
GGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCCGCGGTCAAGGAAATTGCGG
TCAGCTTAAGGCCAAGTGCCACCGAAATTAAGGACGCCGACTTTTTAGCACAGGCCGATCAGCAAGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
GGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACCACCTTAAGCTGGCAAAAGCAGGCGG
CCGAAAACCAGCGTAAAAAAGCGCTGGAAGAATTGAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTGGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTTAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCGGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAACCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGCTGGCCGGTGAAGTACGTTTAATGGTGATTTTAAATGCCAACGGCGGGATTCGCGCGATTCGTTTAATTGAA
AGCTCGGGACATGCCATGCTGGATGAAGCTGCCAAGGCTTCTGTGCGTAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGCATTATCCGGACCTGGCGTTTTGATCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KSY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.344

95.548

0.729

Multiple sequence alignment