Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FKV23_RS12515 Genome accession   NZ_CP041242
Coordinates   2832048..2832461 (-) Length   137 a.a.
NCBI ID   WP_141624143.1    Uniprot ID   -
Organism   Marilutibacter alkalisoli strain SJ-36     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2827048..2837461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FKV23_RS12500 (FKV23_12500) - 2828988..2830997 (-) 2010 WP_141624141.1 methyl-accepting chemotaxis protein -
  FKV23_RS12505 (FKV23_12505) - 2831084..2831641 (-) 558 Protein_2484 chemotaxis protein CheW -
  FKV23_RS12510 (FKV23_12510) - 2831661..2832029 (-) 369 WP_141624142.1 PleD family two-component system response regulator -
  FKV23_RS12515 (FKV23_12515) pilG 2832048..2832461 (-) 414 WP_141624143.1 response regulator Regulator
  FKV23_RS12520 (FKV23_12520) gshB 2832706..2833668 (+) 963 WP_141624144.1 glutathione synthase -
  FKV23_RS12525 (FKV23_12525) - 2833794..2834659 (+) 866 Protein_2488 energy transducer TonB -
  FKV23_RS12530 (FKV23_12530) tsaB 2835208..2835960 (-) 753 WP_141624145.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15305.66 Da        Isoelectric Point: 7.3238

>NTDB_id=370771 FKV23_RS12515 WP_141624143.1 2832048..2832461(-) (pilG) [Marilutibacter alkalisoli strain SJ-36]
MFDEGRTGNLDGLRVMVIDDSRTIRRTAETLLKREGCAVVTAVDGFEALAKIADQQPHIIFVDIMMPRLDGYQTCALIKN
NQMFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTHVHTEAHNA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=370771 FKV23_RS12515 WP_141624143.1 2832048..2832461(-) (pilG) [Marilutibacter alkalisoli strain SJ-36]
ATGTTTGACGAGGGCCGTACAGGCAATCTCGATGGCTTGCGGGTCATGGTGATCGATGACTCCCGCACCATCAGGCGAAC
CGCAGAGACGTTGCTGAAACGCGAGGGATGCGCGGTTGTAACCGCCGTGGATGGATTCGAGGCACTGGCGAAGATCGCCG
ACCAGCAGCCGCACATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTACCAGACCTGCGCGCTGATCAAGAAC
AACCAGATGTTCAAGGGTACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGTGGCCGCATCGT
CGGTTCCGAGCAGTACCTGACCAAACCATTCACGCGCGAGGAGCTCCTCGGCGCGATCCGCACCCACGTACACACCGAAG
CACACAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

88.321

0.664

Multiple sequence alignment