Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HMPREF0772_RS00780 Genome accession   NC_017342
Coordinates   141658..142503 (-) Length   281 a.a.
NCBI ID   WP_001799619.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus TCH60     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 136658..147503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF0772_RS00745 (HMPREF0772_10127) rpsR 137647..137889 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  HMPREF0772_RS00750 (HMPREF0772_10128) ssbA 137941..138444 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  HMPREF0772_RS00755 (HMPREF0772_10129) rpsF 138465..138761 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  HMPREF0772_RS00760 (HMPREF0772_10131) - 139005..139196 (+) 192 WP_001052483.1 hypothetical protein -
  HMPREF0772_RS00765 (HMPREF0772_10132) ychF 139282..140379 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  HMPREF0772_RS00770 - 140391..140593 (-) 203 Protein_134 DUF951 domain-containing protein -
  HMPREF0772_RS00775 (HMPREF0772_10133) - 140623..141504 (-) 882 WP_000373076.1 mechanosensitive ion channel family protein -
  HMPREF0772_RS00780 (HMPREF0772_10134) spo0J 141658..142503 (-) 846 WP_001799619.1 ParB/RepB/Spo0J family partition protein Regulator
  HMPREF0772_RS00785 (HMPREF0772_10135) - 143166..144269 (+) 1104 WP_000655688.1 PLP-dependent transferase -
  HMPREF0772_RS00790 (HMPREF0772_10136) metC 144266..145426 (+) 1161 WP_000175857.1 cystathionine beta-lyase MetC -
  HMPREF0772_RS00795 (HMPREF0772_10137) - 145395..147236 (+) 1842 WP_001248730.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32844.92 Da        Isoelectric Point: 10.1158

>NTDB_id=37062 HMPREF0772_RS00780 WP_001799619.1 141658..142503(-) (spo0J) [Staphylococcus aureus subsp. aureus TCH60]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHFNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIKQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=37062 HMPREF0772_RS00780 WP_001799619.1 141658..142503(-) (spo0J) [Staphylococcus aureus subsp. aureus TCH60]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CGCAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATTTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTAAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-207)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381