Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BMD_RS15830 | Genome accession | NC_014103 |
| Coordinates | 3190185..3190607 (+) | Length | 140 a.a. |
| NCBI ID | WP_013083984.1 | Uniprot ID | A0A1Q8UP88 |
| Organism | Priestia megaterium DSM 319 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 3185185..3195607
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMD_RS15805 (BMD_3256) | - | 3185516..3186349 (-) | 834 | WP_013083979.1 | AraC family transcriptional regulator | - |
| BMD_RS15810 (BMD_3257) | - | 3186572..3187426 (+) | 855 | WP_157862164.1 | sensor histidine kinase | - |
| BMD_RS15815 (BMD_3258) | - | 3187395..3188036 (+) | 642 | WP_013083981.1 | response regulator transcription factor | - |
| BMD_RS15820 (BMD_3259) | - | 3188168..3189550 (+) | 1383 | WP_013083982.1 | PepSY domain-containing protein | - |
| BMD_RS15825 | - | 3189580..3190044 (+) | 465 | WP_042452390.1 | FixH family protein | - |
| BMD_RS15830 (BMD_3261) | nucA/comI | 3190185..3190607 (+) | 423 | WP_013083984.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| BMD_RS15835 (BMD_3262) | - | 3190762..3191115 (+) | 354 | WP_258468631.1 | DUF1516 family protein | - |
| BMD_RS15840 (BMD_3263) | - | 3191156..3191749 (-) | 594 | WP_013083986.1 | hypothetical protein | - |
| BMD_RS15845 (BMD_3264) | - | 3192023..3192508 (-) | 486 | WP_013083987.1 | hypothetical protein | - |
| BMD_RS15850 (BMD_3265) | fsa | 3192586..3193254 (-) | 669 | WP_013083988.1 | fructose-6-phosphate aldolase | - |
| BMD_RS15855 (BMD_3266) | gnd | 3193304..3194197 (-) | 894 | WP_013083989.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 15356.20 Da Isoelectric Point: 4.4990
>NTDB_id=37039 BMD_RS15830 WP_013083984.1 3190185..3190607(+) (nucA/comI) [Priestia megaterium DSM 319]
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGNGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGNGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
Nucleotide
Download Length: 423 bp
>NTDB_id=37039 BMD_RS15830 WP_013083984.1 3190185..3190607(+) (nucA/comI) [Priestia megaterium DSM 319]
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGTGCTGAAGAAAACCGCCGTGAATCTTTAAAA
GGCATTCCGACTAAAAGCGGCTACGATCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAACGGTGCAGACAT
TGAATATGTAAAGCCTTCAGACAACCGAGGCGCCGGATCTTGGATCTCACATCAAGTAGACGAGTTTCCAGACGGCACGA
AGGTTTTAATTGAAGTGAAGTAA
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGTGCTGAAGAAAACCGCCGTGAATCTTTAAAA
GGCATTCCGACTAAAAGCGGCTACGATCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAACGGTGCAGACAT
TGAATATGTAAAGCCTTCAGACAACCGAGGCGCCGGATCTTGGATCTCACATCAAGTAGACGAGTTTCCAGACGGCACGA
AGGTTTTAATTGAAGTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
61.207 |
82.857 |
0.507 |