Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   G3T48_RS05785 Genome accession   NZ_CP048760
Coordinates   1113769..1114263 (+) Length   164 a.a.
NCBI ID   WP_032583788.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZS005     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1108769..1119263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T48_RS05770 (G3T48_05770) - 1110155..1111333 (-) 1179 WP_167840670.1 metal-dependent hydrolase -
  G3T48_RS05775 (G3T48_05775) gpsA 1111343..1112239 (-) 897 WP_079460087.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  G3T48_RS05780 (G3T48_05780) gatB 1112236..1113654 (-) 1419 WP_087691887.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB -
  G3T48_RS05785 (G3T48_05785) luxS 1113769..1114263 (+) 495 WP_032583788.1 S-ribosylhomocysteine lyase Regulator
  G3T48_RS05790 (G3T48_05790) - 1114574..1115566 (+) 993 WP_002868574.1 isopenicillin N synthase family oxygenase -
  G3T48_RS05795 (G3T48_05795) - 1115577..1116347 (+) 771 WP_052793737.1 MetQ/NlpA family ABC transporter substrate-binding protein -
  G3T48_RS05800 (G3T48_05800) metE 1116359..1118623 (+) 2265 WP_052793736.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -

Sequence

Protein


Download         Length: 164 a.a.        Molecular weight: 18227.21 Da        Isoelectric Point: 6.6314

>NTDB_id=370368 G3T48_RS05785 WP_032583788.1 1113769..1114263(+) (luxS) [Campylobacter jejuni strain ZS005]
MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPNKDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISP
MGCRTGFYMSLIGTPDEKSIAKAWEAAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIMNNKELK
LENA

Nucleotide


Download         Length: 495 bp        

>NTDB_id=370368 G3T48_RS05785 WP_032583788.1 1113769..1114263(+) (luxS) [Campylobacter jejuni strain ZS005]
ATGCCATTATTAGACAGCTTTAAAGTTGACCATACTAAAATGCCAGCTCCTGCTGTGCGTTTAGCTAAAGTTATGAAAAC
ACCTAAGGGTGATGATATTAGTGTATTTGATTTGCGTTTTTGCATACCAAATAAAGACATTATGAGCGAAAAAGGTACTC
ATACCTTAGAACATTTATTCGCAGGATTTATGAGAGATCATTTAAATTCAAATTCAGTTGAAATTATTGATATTTCACCT
ATGGGTTGTCGCACGGGTTTTTATATGAGTTTAATTGGAACACCTGATGAGAAAAGTATTGCAAAAGCTTGGGAAGCAGC
CATGAAAGATGTTTTAAGCGTAAGCGATCAAAGCAAAATTCCTGAACTTAATATCTATCAATGCGGAACTTGCGCAATGC
ATTCTTTAGATGAAGCCAAACAAATTGCCCAAAAAGTTTTAAATCTAGGTATTAGCATAATGAATAACAAAGAATTAAAA
CTCGAGAATGCTTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-154)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

72.05

98.171

0.707

Multiple sequence alignment