Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | G3T48_RS05535 | Genome accession | NZ_CP048760 |
| Coordinates | 1067224..1068183 (+) | Length | 319 a.a. |
| NCBI ID | WP_087695967.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain ZS005 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1062224..1073183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3T48_RS05510 (G3T48_05510) | neuB | 1062725..1063765 (+) | 1041 | WP_087695971.1 | N-acetylneuraminate synthase | - |
| G3T48_RS05515 (G3T48_05515) | neuC | 1063762..1064880 (+) | 1119 | WP_087695970.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| G3T48_RS05520 (G3T48_05520) | - | 1064877..1065542 (+) | 666 | WP_087695969.1 | acylneuraminate cytidylyltransferase family protein | - |
| G3T48_RS05525 (G3T48_05525) | - | 1065688..1066362 (+) | 675 | WP_251814092.1 | CatB-related O-acetyltransferase | - |
| G3T48_RS05530 (G3T48_05530) | waaV | 1066354..1067165 (-) | 812 | Protein_1082 | glycosyltransferase family 2 protein | - |
| G3T48_RS05535 (G3T48_05535) | waaF | 1067224..1068183 (+) | 960 | WP_087695967.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| G3T48_RS05540 (G3T48_05540) | gmhA | 1068164..1068724 (-) | 561 | WP_087695966.1 | D-sedoheptulose 7-phosphate isomerase | - |
| G3T48_RS05545 (G3T48_05545) | rfaE1 | 1068721..1070106 (-) | 1386 | WP_087695965.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| G3T48_RS05550 (G3T48_05550) | rfaD | 1070099..1071052 (-) | 954 | WP_002867398.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| G3T48_RS05555 (G3T48_05555) | gmhB | 1071053..1071614 (-) | 562 | Protein_1087 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| G3T48_RS05560 (G3T48_05560) | - | 1071695..1071997 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| G3T48_RS05565 (G3T48_05565) | ccoS | 1072021..1072227 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36730.30 Da Isoelectric Point: 10.3046
>NTDB_id=370366 G3T48_RS05535 WP_087695967.1 1067224..1068183(+) (waaF) [Campylobacter jejuni strain ZS005]
MKIFIHLPTWLGDAVMASPALCTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKTHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLTCMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL
MKIFIHLPTWLGDAVMASPALCTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKTHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLTCMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL
Nucleotide
Download Length: 960 bp
>NTDB_id=370366 G3T48_RS05535 WP_087695967.1 1067224..1068183(+) (waaF) [Campylobacter jejuni strain ZS005]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATGCACTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAACTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGTCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAACTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACCCTCATCTATAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATGCACTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAACTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGTCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAACTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACCCTCATCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.357 |
100 |
0.944 |