Detailed information NTG0370283

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FJQ89_RS22555
• Genome accession: NZ_CP041185
• Coordinates: 5126779..5127837 (-)
• Length: 352 a.a.
• NCBI ID: WP_141171778.1
• Uniprot ID: A0A4Y6RIR6
• Organism: Janthinobacterium tructae strain SNU WT1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5121779..5132837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FJQ89_RS22530 (FJQ89_22530)	-	5122815..5123267 (-)	453	WP_141171775.1	hypothetical protein	-
FJQ89_RS22535 (FJQ89_22535)	-	5123446..5123712 (+)	267	WP_071079406.1	hypothetical protein	-
FJQ89_RS22540 (FJQ89_22540)	rpoH	5123802..5124701 (-)	900	WP_205704520.1	RNA polymerase sigma factor RpoH	-
FJQ89_RS22545 (FJQ89_22545)	ftsX	5125110..5126030 (-)	921	WP_141171776.1	permease-like cell division protein FtsX	-
FJQ89_RS22550 (FJQ89_22550)	-	5126027..5126770 (-)	744	WP_141171777.1	ATP-binding cassette domain-containing protein	-
FJQ89_RS22555 (FJQ89_22555)	pilA	5126779..5127837 (-)	1059	WP_141171778.1	signal recognition particle-docking protein FtsY	Machinery gene
FJQ89_RS22560 (FJQ89_22560)	-	5128002..5128943 (-)	942	WP_141171779.1	MerR family transcriptional regulator	-
FJQ89_RS22565 (FJQ89_22565)	-	5129149..5130462 (+)	1314	WP_141171780.1	FAD-dependent oxidoreductase	-
FJQ89_RS22570 (FJQ89_22570)	-	5130452..5131243 (+)	792	WP_141171781.1	DUF1365 domain-containing protein	-
FJQ89_RS22575 (FJQ89_22575)	-	5131240..5132481 (+)	1242	WP_243136208.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37360.61 Da
• Isoelectric Point: 6.8952

>NTDB_id=370283 FJQ89_RS22555 WP_141171778.1 5126779..5127837(-) (pilA) [Janthinobacterium tructae strain SNU WT1]
MFSFFKKKSTAPEAAPAEPLVLPAATPPAPQPAATPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGA
KIDEALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRHKPLVMMISGV
NGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVTVISQESGDPAAVAYDSVQSAKARGIDVVMVD
TAGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIAR
VRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1059 bp

>NTDB_id=370283 FJQ89_RS22555 WP_141171778.1 5126779..5127837(-) (pilA) [Janthinobacterium tructae strain SNU WT1]
ATGTTTAGTTTCTTCAAGAAAAAATCCACCGCTCCCGAGGCTGCGCCAGCCGAGCCCCTAGTCCTTCCCGCCGCCACGCC
GCCGGCACCGCAGCCTGCCGCCACGCCCCTGAGTGGCGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCG
AGAAAAAATCGTGGATGACGCGCCTGAAAGCCGGCCTGTCAAAAACCTCGAACACCTTATCCGTGCTGTTCGTCGGCGCG
AAGATCGACGAGGCCCTGTACGAAGAGCTGGAAGCGGCGCTGCTGATGTCCGACGCGGGCATCGACGCCACCGAATTTTT
GCTCACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCCGCCGCCGTCAAGGCCGCGCTGAAAGTGCTGC
TGATCGACCTGCTCTCGCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCCACAAGCCGCTGGTGATGATGATTTCCGGCGTA
AATGGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAATCAATCCGTGCTGCTGGCCGC
GGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGATGGTCTGGGGCGAGCGCAACAACGTCACCGTCATCTCGCAGG
AATCGGGCGACCCGGCCGCTGTGGCCTACGACTCCGTGCAATCGGCAAAAGCGCGCGGCATCGACGTGGTGATGGTCGAC
ACGGCGGGCCGCTTGCCGACGCAGTTGCACCTGATGGAAGAGTTAAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGA
AGGCGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGCCAGAATGCCCTCACGCAAGTGAAAGCGTTCGACG
ATGCCCTGCAATTGAGCGGCCTGGTGATCACCAAGCTCGATGGTACCGCCAAGGGCGGCGTGCTGGCAGCGATTGCCCGC
GTACGCCCCGTGCCCGTGTATTTCATCGGCATCGGTGAGAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGT
CGAAGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (71-131)

• SRP54-type protein, GTPase domain (SRP54) (153-352)

3D structure

• AlphaFold DB: A0A4Y6RIR6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	57.012	93.182	0.531