Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BMD_RS03425 Genome accession   NC_014103
Coordinates   661741..661935 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium DSM 319     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 656741..666935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMD_RS03400 (BMD_0690) galT 656806..658329 (+) 1524 WP_013081742.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  BMD_RS03405 (BMD_0691) - 658372..659256 (-) 885 WP_013081743.1 NAD(P)-dependent oxidoreductase -
  BMD_RS03410 (BMD_0692) - 659459..659647 (-) 189 WP_013055400.1 YjzD family protein -
  BMD_RS03415 (BMD_0693) - 659857..660597 (+) 741 WP_013081744.1 hypothetical protein -
  BMD_RS03420 (BMD_0694) - 660779..661663 (+) 885 WP_013081745.1 NAD(P)-dependent oxidoreductase -
  BMD_RS03425 (BMD_0695) comZ 661741..661935 (+) 195 WP_013081746.1 ComZ family protein Regulator
  BMD_RS03430 - 661964..662164 (-) 201 WP_016763038.1 hypothetical protein -
  BMD_RS03435 (BMD_0696) - 662421..663359 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  BMD_RS03440 (BMD_0697) fabF 663399..664640 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  BMD_RS03445 (BMD_0698) - 664746..665519 (+) 774 WP_013081748.1 DUF2268 domain-containing protein -
  BMD_RS03450 (BMD_0699) - 665746..666768 (+) 1023 WP_013081749.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=37020 BMD_RS03425 WP_013081746.1 661741..661935(+) (comZ) [Priestia megaterium DSM 319]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=37020 BMD_RS03425 WP_013081746.1 661741..661935(+) (comZ) [Priestia megaterium DSM 319]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment