Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   GAU34_RS04835 Genome accession   NZ_CP048643
Coordinates   996645..997115 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain SR153     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 991645..1002115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GAU34_RS04805 (GAU34_04805) - 991688..992101 (+) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -
  GAU34_RS04810 (GAU34_04810) - 992300..992743 (+) 444 WP_000070866.1 Dps family protein -
  GAU34_RS04815 (GAU34_04815) deoD 992864..993574 (-) 711 WP_063653191.1 purine-nucleoside phosphorylase -
  GAU34_RS04820 (GAU34_04820) deoC 993888..994550 (+) 663 WP_001083318.1 deoxyribose-phosphate aldolase -
  GAU34_RS04825 (GAU34_04825) - 994829..996129 (+) 1301 Protein_961 pyrimidine-nucleoside phosphorylase -
  GAU34_RS04830 (GAU34_04830) - 996143..996493 (+) 351 WP_001024035.1 membrane protein -
  GAU34_RS04835 (GAU34_04835) luxS 996645..997115 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  GAU34_RS04840 (GAU34_04840) - 997426..998610 (+) 1185 WP_001291497.1 M20 family metallopeptidase -
  GAU34_RS04845 (GAU34_04845) - 998610..999803 (+) 1194 WP_000183717.1 hypothetical protein -
  GAU34_RS04850 (GAU34_04850) - 1000202..1000872 (+) 671 Protein_966 DUF2750 domain-containing protein -
  GAU34_RS04855 (GAU34_04855) coaW 1001003..1001806 (-) 804 WP_000862728.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=370134 GAU34_RS04835 WP_000164421.1 996645..997115(-) (luxS) [Staphylococcus aureus strain SR153]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=370134 GAU34_RS04835 WP_000164421.1 996645..997115(-) (luxS) [Staphylococcus aureus strain SR153]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404