Detailed information NTG0370117

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GCO85_RS13435
• Genome accession: NZ_CP048618
• Coordinates: 3020051..3021118 (-)
• Length: 355 a.a.
• NCBI ID: WP_014842712.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain ERS1305867
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3015051..3026118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GCO85_RS13410 (GCO85_13420)	-	3015348..3016058 (-)	711	WP_027226746.1	dienelactone hydrolase family protein	-
GCO85_RS13415 (GCO85_13425)	-	3016340..3017206 (+)	867	WP_014844768.1	alpha/beta hydrolase	-
GCO85_RS13420 (GCO85_13430)	rpoH	3017341..3018195 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
GCO85_RS13425 (GCO85_13435)	ftsX	3018491..3019420 (-)	930	WP_014844769.1	permease-like cell division protein FtsX	-
GCO85_RS13430 (GCO85_13440)	ftsE	3019414..3020064 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
GCO85_RS13435 (GCO85_13445)	pilA	3020051..3021118 (-)	1068	WP_014842712.1	signal recognition particle-docking protein FtsY	Machinery gene
GCO85_RS13440 (GCO85_13450)	-	3021181..3022506 (+)	1326	WP_014844770.1	pitrilysin family protein	-
GCO85_RS13445 (GCO85_13455)	-	3022503..3023807 (+)	1305	WP_061637084.1	pitrilysin family protein	-
GCO85_RS13450 (GCO85_13460)	rsmD	3023804..3024349 (+)	546	WP_014844772.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GCO85_RS13455 (GCO85_13465)	dotD	3024424..3024915 (+)	492	WP_014842716.1	type IVB secretion system lipoprotein DotD	-
GCO85_RS13460 (GCO85_13470)	dotC	3024896..3025807 (+)	912	WP_011216545.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39054.59 Da
• Isoelectric Point: 5.8671

>NTDB_id=370117 GCO85_RS13435 WP_014842712.1 3020051..3021118(-) (pilA) [Legionella pneumophila strain ERS1305867]
MIKWFKRNQNSEPNLDTEEHQDHAESSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=370117 GCO85_RS13435 WP_014842712.1 3020051..3021118(-) (pilA) [Legionella pneumophila strain ERS1305867]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCACCAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCAGACTCTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGTTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGT
GCCGGTAAAACAACCACGATTGGTAAGCTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAGCAATTGCATGTATGGGGTGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (150-350)

• SRP54-type protein, helical bundle domain (SRP54_N) (64-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.478	84.789	0.479