Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   BLCSL_RS17465 Genome accession   NZ_CP041154
Coordinates   3308789..3308929 (-) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus licheniformis strain CSL2     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3303789..3313929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLCSL_RS17440 (BLCSL_17440) - 3304086..3304475 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  BLCSL_RS17445 (BLCSL_17445) comA 3304492..3305130 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  BLCSL_RS17450 (BLCSL_17450) comP 3305217..3307523 (-) 2307 WP_025807478.1 ATP-binding protein Regulator
  BLCSL_RS17455 (BLCSL_17455) comX 3307546..3307710 (-) 165 WP_003184853.1 competence pheromone ComX -
  BLCSL_RS17460 (BLCSL_17460) - 3307719..3308600 (-) 882 WP_003184856.1 polyprenyl synthetase family protein -
  BLCSL_RS17465 (BLCSL_17465) degQ 3308789..3308929 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  BLCSL_RS17475 (BLCSL_17475) - 3309415..3309762 (+) 348 WP_009329512.1 hypothetical protein -
  BLCSL_RS17480 (BLCSL_17480) - 3309805..3311025 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  BLCSL_RS17485 (BLCSL_17485) - 3311204..3312673 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  BLCSL_RS17490 (BLCSL_17490) - 3312691..3313242 (-) 552 WP_003184868.1 cysteine hydrolase family protein -
  BLCSL_RS17495 (BLCSL_17495) - 3313427..3313828 (-) 402 WP_003184870.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=370019 BLCSL_RS17465 WP_003184860.1 3308789..3308929(-) (degQ) [Bacillus licheniformis strain CSL2]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=370019 BLCSL_RS17465 WP_003184860.1 3308789..3308929(-) (degQ) [Bacillus licheniformis strain CSL2]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATCTAAAAACCTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652

Multiple sequence alignment