Detailed information NTG0369970

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: G3M73_RS15570
• Genome accession: NZ_CP048605
• Coordinates: 3356974..3357957 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain PapRG-06-5
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3351974..3362957

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3M73_RS15550 (G3M73_15550)	dppA	3353117..3354724 (+)	1608	WP_001222888.1	dipeptide ABC transporter substrate-binding protein DppA	-
G3M73_RS15555 (G3M73_15555)	-	3354787..3355014 (-)	228	WP_032149962.1	hypothetical protein	-
G3M73_RS15560 (G3M73_15560)	dppB	3355032..3356051 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
G3M73_RS15565 (G3M73_15565)	dppC	3356061..3356963 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
G3M73_RS15570 (G3M73_15570)	amiE	3356974..3357957 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
G3M73_RS15575 (G3M73_15575)	dppF	3357954..3358958 (+)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
G3M73_RS15580 (G3M73_15580)	yhjV	3358988..3360259 (-)	1272	WP_001313380.1	aromatic amino acid transport family protein	-
G3M73_RS15585 (G3M73_15585)	-	3360735..3360842 (+)	108	WP_072193518.1	type I toxin-antitoxin system toxin Ldr family protein	-
G3M73_RS15590 (G3M73_15590)	-	3361218..3361325 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
G3M73_RS23175	-	3361701..3361808 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=369970 G3M73_RS15570 WP_001196496.1 3356974..3357957(+) (amiE) [Escherichia coli strain PapRG-06-5]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=369970 G3M73_RS15570 WP_001196496.1 3356974..3357957(+) (amiE) [Escherichia coli strain PapRG-06-5]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTCAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCGATGGCCATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTAAC
CATTCAGGCGCAAATCATCGAACTGCTGCTGGAGCTACAGCAAAAAGAGAACATGGCGCTGGTGTTAATTACCCATGATC
TGGCTCTGGTGGCGGAAGCTGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACACAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401