Detailed information NTG0369890

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FI878_RS11210
• Genome accession: NZ_CP041148
• Coordinates: 2290802..2291503 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CUVET-MIC596
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2285802..2296503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FI878_RS11180 (FI878_11335)	-	2286108..2286551 (-)	444	WP_001246675.1	SRPBCC family protein	-
FI878_RS11185 (FI878_11340)	tadA	2286621..2287124 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
FI878_RS11190 (FI878_11345)	-	2287131..2288255 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
FI878_RS11195 (FI878_11350)	ung	2288252..2288965 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
FI878_RS11200 (FI878_11355)	-	2289016..2289612 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
FI878_RS11205 (FI878_11360)	gspK	2289843..2290802 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
FI878_RS11210 (FI878_11365)	xcpW	2290802..2291503 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FI878_RS11215 (FI878_11370)	xcpV	2291503..2291883 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
FI878_RS11220 (FI878_11375)	-	2291873..2292427 (-)	555	WP_000841373.1	type II secretion system protein	-
FI878_RS11225 (FI878_11380)	-	2292437..2293045 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FI878_RS11230 (FI878_11385)	-	2293083..2293856 (-)	774	WP_000497298.1	TatD family hydrolase	-
FI878_RS11235 (FI878_11390)	-	2293874..2294215 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
FI878_RS11240 (FI878_11395)	-	2294227..2295207 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
FI878_RS11245 (FI878_11400)	kdsB	2295219..2295980 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=369890 FI878_RS11210 WP_000594589.1 2290802..2291503(-) (xcpW) [Acinetobacter baumannii strain CUVET-MIC596]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=369890 FI878_RS11210 WP_000594589.1 2290802..2291503(-) (xcpW) [Acinetobacter baumannii strain CUVET-MIC596]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996