Detailed information NTG0369877

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: G3M72_RS13060
• Genome accession: NZ_CP048604
• Coordinates: 2753303..2754328 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PapRG-06-3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2748303..2759328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3M72_RS13050 (G3M72_13050)	rpmE	2750534..2750746 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
G3M72_RS13055 (G3M72_13055)	priA	2750949..2753147 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
G3M72_RS13060 (G3M72_13060)	cytR	2753303..2754328 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
G3M72_RS13065 (G3M72_13065)	ftsN	2754420..2755379 (+)	960	WP_000068834.1	cell division protein FtsN	-
G3M72_RS13070 (G3M72_13070)	hslV	2755472..2756002 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
G3M72_RS13075 (G3M72_13075)	hslU	2756012..2757343 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
G3M72_RS13080 (G3M72_13080)	menA	2757410..2758336 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
G3M72_RS13085 (G3M72_13085)	rraA	2758429..2758914 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
G3M72_RS13090 (G3M72_13090)	zapB	2758999..2759244 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=369877 G3M72_RS13060 WP_000644904.1 2753303..2754328(+) (cytR) [Escherichia coli strain PapRG-06-3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=369877 G3M72_RS13060 WP_000644904.1 2753303..2754328(+) (cytR) [Escherichia coli strain PapRG-06-3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628