Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | G3M72_RS10300 | Genome accession | NZ_CP048604 |
| Coordinates | 2145705..2146145 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360895.1 | Uniprot ID | B7LFX5 |
| Organism | Escherichia coli strain PapRG-06-3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2140705..2151145
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3M72_RS10280 (G3M72_10280) | aroP | 2141703..2143076 (+) | 1374 | WP_001331235.1 | aromatic amino acid transporter AroP | - |
| G3M72_RS10285 (G3M72_10285) | ampE | 2143119..2143973 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| G3M72_RS10290 (G3M72_10290) | ampD | 2143970..2144521 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| G3M72_RS10295 (G3M72_10295) | nadC | 2144609..2145502 (+) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| G3M72_RS10300 (G3M72_10300) | pilA | 2145705..2146145 (+) | 441 | WP_000360895.1 | prepilin peptidase-dependent pilin | Machinery gene |
| G3M72_RS10305 (G3M72_10305) | pilB | 2146155..2147540 (+) | 1386 | WP_001025173.1 | type II secretion system protein GspE | Machinery gene |
| G3M72_RS10310 (G3M72_10310) | hofC | 2147530..2148732 (+) | 1203 | WP_000157234.1 | protein transport protein HofC | - |
| G3M72_RS10315 (G3M72_10315) | guaC | 2148767..2149810 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| G3M72_RS22380 | - | 2149966..2150010 (-) | 45 | WP_120795372.1 | protein YacM | - |
| G3M72_RS10320 (G3M72_10320) | coaE | 2150035..2150655 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15602.71 Da Isoelectric Point: 4.3927
>NTDB_id=369866 G3M72_RS10300 WP_000360895.1 2145705..2146145(+) (pilA) [Escherichia coli strain PapRG-06-3]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=369866 G3M72_RS10300 WP_000360895.1 2145705..2146145(+) (pilA) [Escherichia coli strain PapRG-06-3]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |