Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   D073_RS07095 Genome accession   NZ_CP041145
Coordinates   1348826..1349290 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain At1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1343826..1354290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D073_RS07075 (D073_1346) - 1344307..1346127 (+) 1821 WP_007409606.1 PAS domain-containing protein -
  D073_RS07080 (D073_1347) - 1346108..1347321 (-) 1214 Protein_1329 aminotransferase A -
  D073_RS19510 (D073_1348) - 1347522..1347683 (-) 162 WP_007409608.1 hypothetical protein -
  D073_RS07090 (D073_1349) cheV 1347872..1348783 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  D073_RS07095 (D073_1350) kre 1348826..1349290 (-) 465 WP_003154622.1 YkyB family protein Regulator
  D073_RS07100 (D073_1351) - 1349413..1350705 (-) 1293 WP_015239757.1 MFS transporter -
  D073_RS07105 (D073_1352) - 1350781..1351275 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  D073_RS07110 (D073_1353) - 1351350..1352213 (-) 864 WP_020955742.1 metallophosphoesterase -
  D073_RS07115 (D073_1354) fadH 1352358..1353122 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  D073_RS07120 (D073_1355) - 1353236..1353784 (+) 549 WP_020955743.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=369814 D073_RS07095 WP_003154622.1 1348826..1349290(-) (kre) [Bacillus velezensis strain At1]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=369814 D073_RS07095 WP_003154622.1 1348826..1349290(-) (kre) [Bacillus velezensis strain At1]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment