Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SAA6008_RS03550 Genome accession   NC_017341
Coordinates   733393..734067 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus subsp. aureus str. JKD6008     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 728393..739067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAA6008_RS03520 (SAA6008_00670) - 728608..729675 (+) 1068 WP_000980134.1 membrane protein -
  SAA6008_RS03525 (SAA6008_00671) - 729826..730869 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  SAA6008_RS03535 (SAA6008_00672) - 731198..731626 (+) 429 WP_000198504.1 hypothetical protein -
  SAA6008_RS03540 (SAA6008_00673) - 731835..732341 (-) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  SAA6008_RS03545 (SAA6008_00674) graX 732454..733377 (+) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  SAA6008_RS03550 (SAA6008_00675) braR 733393..734067 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  SAA6008_RS03555 (SAA6008_00676) graS 734060..735100 (+) 1041 WP_001061248.1 histidine kinase GraS/ApsS -
  SAA6008_RS03560 (SAA6008_00677) vraF 735244..736005 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  SAA6008_RS03565 (SAA6008_00678) vraG 735995..737884 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=36981 SAA6008_RS03550 WP_001166505.1 733393..734067(+) (braR) [Staphylococcus aureus subsp. aureus str. JKD6008]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=36981 SAA6008_RS03550 WP_001166505.1 733393..734067(+) (braR) [Staphylococcus aureus subsp. aureus str. JKD6008]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402

Multiple sequence alignment