Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SAA6008_RS02540 Genome accession   NC_017341
Coordinates   535070..535873 (+) Length   267 a.a.
NCBI ID   WP_001134195.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus str. JKD6008     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 530070..540873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAA6008_RS02515 (SAA6008_00485) - 531616..532953 (+) 1338 WP_000812832.1 aminotransferase class V-fold PLP-dependent enzyme -
  SAA6008_RS02520 (SAA6008_00486) tmk 532955..533572 (+) 618 WP_001272126.1 dTMP kinase -
  SAA6008_RS02525 (SAA6008_00487) - 533600..533929 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  SAA6008_RS02535 (SAA6008_00488) - 534143..535069 (+) 927 WP_000344337.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  SAA6008_RS02540 (SAA6008_00489) yaaT 535070..535873 (+) 804 WP_001134195.1 stage 0 sporulation family protein Regulator
  SAA6008_RS02545 (SAA6008_00490) yabA 535890..536237 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  SAA6008_RS02550 (SAA6008_00491) - 536511..537236 (+) 726 WP_000910689.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  SAA6008_RS02555 (SAA6008_00492) - 537229..537477 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  SAA6008_RS02560 (SAA6008_00493) rsmI 537479..538318 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SAA6008_RS02570 (SAA6008_00494) metG 538603..540576 (+) 1974 WP_001051127.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30222.85 Da        Isoelectric Point: 4.5801

>NTDB_id=36976 SAA6008_RS02540 WP_001134195.1 535070..535873(+) (yaaT) [Staphylococcus aureus subsp. aureus str. JKD6008]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGS
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=36976 SAA6008_RS02540 WP_001134195.1 535070..535873(+) (yaaT) [Staphylococcus aureus subsp. aureus str. JKD6008]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGATCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

61.977

98.502

0.61

Multiple sequence alignment