Detailed information NTG0369719

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: FIM06_RS02000
• Genome accession: NZ_CP041144
• Coordinates: 393695..394843 (+)
• Length: 382 a.a.
• NCBI ID: WP_029326229.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain UCMB5044
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 388695..399843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIM06_RS01980 (FIM06_0386)	-	389098..389781 (-)	684	WP_105938099.1	ABC transporter ATP-binding protein	-
FIM06_RS01985 (FIM06_0387)	-	389796..391226 (-)	1431	WP_105938098.1	ABC transporter permease	-
FIM06_RS01990 (FIM06_0388)	-	391439..392122 (+)	684	WP_007609386.1	response regulator transcription factor	-
FIM06_RS01995 (FIM06_0389)	-	392109..393536 (+)	1428	WP_181364943.1	HAMP domain-containing sensor histidine kinase	-
FIM06_RS02000 (FIM06_0390)	rapC	393695..394843 (+)	1149	WP_029326229.1	Rap family tetratricopeptide repeat protein	Regulator
FIM06_RS02005 (FIM06_0391)	phrC	394827..394946 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
FIM06_RS02010	-	395095..395205 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
FIM06_RS02015 (FIM06_0392)	-	395285..396649 (-)	1365	WP_105938096.1	aspartate kinase	-
FIM06_RS02020 (FIM06_0393)	ceuB	397063..398016 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
FIM06_RS02025 (FIM06_0394)	-	398006..398953 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
FIM06_RS02030 (FIM06_0395)	-	398947..399705 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45406.59 Da
• Isoelectric Point: 4.9221

>NTDB_id=369719 FIM06_RS02000 WP_029326229.1 393695..394843(+) (rapC) [Bacillus velezensis strain UCMB5044]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFSYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=369719 FIM06_RS02000 WP_029326229.1 393695..394843(+) (rapC) [Bacillus velezensis strain UCMB5044]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCAGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568