Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FJM75_RS21915 Genome accession   NZ_CP041063
Coordinates   4280204..4280380 (+) Length   58 a.a.
NCBI ID   WP_166001450.1    Uniprot ID   -
Organism   Bacillus sp. Cs-700     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4275204..4285380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FJM75_RS21880 - 4275486..4275674 (+) 189 WP_098443110.1 YjzC family protein -
  FJM75_RS21885 - 4275726..4275905 (-) 180 WP_098443111.1 YjzD family protein -
  FJM75_RS21890 - 4275978..4276439 (-) 462 WP_166001440.1 TspO/MBR family protein -
  FJM75_RS21895 - 4276652..4277374 (+) 723 WP_166001442.1 alpha/beta hydrolase -
  FJM75_RS21900 - 4277379..4278566 (-) 1188 WP_166001444.1 FAD-dependent oxidoreductase -
  FJM75_RS21905 - 4278663..4279574 (+) 912 WP_166001446.1 NAD(P)-dependent oxidoreductase -
  FJM75_RS21910 - 4279604..4280158 (+) 555 WP_166001448.1 DinB family protein -
  FJM75_RS21915 comZ 4280204..4280380 (+) 177 WP_166001450.1 ComZ family protein Regulator
  FJM75_RS21920 - 4280393..4280536 (+) 144 WP_159782169.1 hypothetical protein -
  FJM75_RS21925 - 4280568..4280894 (-) 327 WP_166001452.1 YppG family protein -
  FJM75_RS21930 - 4281064..4282002 (+) 939 WP_159782171.1 beta-ketoacyl-ACP synthase III -
  FJM75_RS21935 fabF 4282037..4283275 (+) 1239 WP_166001454.1 beta-ketoacyl-ACP synthase II -
  FJM75_RS21940 - 4284059..4284805 (+) 747 WP_098443121.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6808.88 Da        Isoelectric Point: 4.0548

>NTDB_id=369266 FJM75_RS21915 WP_166001450.1 4280204..4280380(+) (comZ) [Bacillus sp. Cs-700]
MDQNMKFMQIAMKYLPEAKQSLGEQDIELDLEKMQPLLQLFLKAMEDAYELGKQDAQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=369266 FJM75_RS21915 WP_166001450.1 4280204..4280380(+) (comZ) [Bacillus sp. Cs-700]
ATGGATCAAAACATGAAATTTATGCAAATTGCAATGAAGTATTTACCTGAAGCGAAACAATCGCTTGGTGAACAGGACAT
TGAACTTGATCTTGAAAAAATGCAGCCGCTACTTCAGCTCTTTCTTAAAGCGATGGAAGATGCTTATGAGCTTGGAAAGC
AGGATGCACAGGAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(2-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

53.571

96.552

0.517

Multiple sequence alignment