Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FIV34_RS15470 Genome accession   NZ_CP041046
Coordinates   3402139..3402540 (-) Length   133 a.a.
NCBI ID   WP_269745857.1    Uniprot ID   -
Organism   Luteibacter pinisoli strain MAH-14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3397139..3407540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIV34_RS15455 (FIV34_15455) - 3398979..3400964 (-) 1986 WP_246058642.1 methyl-accepting chemotaxis protein -
  FIV34_RS15460 (FIV34_15460) - 3401178..3401723 (-) 546 WP_139984294.1 chemotaxis protein CheW -
  FIV34_RS15465 (FIV34_15465) - 3401736..3402107 (-) 372 WP_139984296.1 response regulator -
  FIV34_RS15470 (FIV34_15470) pilG 3402139..3402540 (-) 402 WP_269745857.1 twitching motility response regulator PilG Regulator
  FIV34_RS15475 (FIV34_15475) gshB 3402798..3403739 (+) 942 WP_139984298.1 glutathione synthase -
  FIV34_RS15480 (FIV34_15480) - 3403736..3404599 (+) 864 WP_139984300.1 energy transducer TonB -
  FIV34_RS15485 (FIV34_15485) - 3404593..3404928 (-) 336 WP_211352644.1 hypothetical protein -
  FIV34_RS15490 (FIV34_15490) - 3405020..3405586 (+) 567 WP_139984302.1 YqgE/AlgH family protein -
  FIV34_RS15495 (FIV34_15495) ruvX 3405590..3406009 (+) 420 WP_139984305.1 Holliday junction resolvase RuvX -
  FIV34_RS15500 (FIV34_15500) - 3406043..3406969 (+) 927 WP_139984307.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14649.93 Da        Isoelectric Point: 8.4889

>NTDB_id=369166 FIV34_RS15470 WP_269745857.1 3402139..3402540(-) (pilG) [Luteibacter pinisoli strain MAH-14]
MNDNGRGTDLAGLRVMVIDDSKTIRRTAETLLKKEGCDVLTAVDGFEALAKISDQKPNIIFVDIMMPRLDGYQTCALIKN
NAQFRGTPVIMLSSKDGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRYATAG

Nucleotide


Download         Length: 402 bp        

>NTDB_id=369166 FIV34_RS15470 WP_269745857.1 3402139..3402540(-) (pilG) [Luteibacter pinisoli strain MAH-14]
GTGAACGACAACGGACGCGGTACGGACCTGGCCGGCTTGCGGGTCATGGTCATCGACGACTCGAAAACCATCCGCCGTAC
GGCAGAGACCCTGTTGAAAAAAGAAGGCTGCGACGTGCTGACCGCCGTCGACGGCTTCGAGGCTTTGGCCAAGATCTCCG
ACCAGAAGCCGAACATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGTTATCAGACCTGCGCGCTGATCAAGAAC
AATGCCCAGTTCCGTGGCACGCCCGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGTCGCATCGT
GGGCGCCGAGCAATACCTCACCAAGCCGTTCACCCGCGACGAACTCCTCGGCGCGATCCATCGCTATGCGACGGCCGGCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.074

90.977

0.647

Multiple sequence alignment