Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   FIU19_RS09750 Genome accession   NZ_CP041010
Coordinates   1803166..1803882 (+) Length   238 a.a.
NCBI ID   WP_064139150.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FDAARGOS_766     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1798166..1808882
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU19_RS09720 (FIU19_09715) - 1798385..1799011 (+) 627 WP_000522384.1 nitroreductase family protein -
  FIU19_RS09725 (FIU19_09720) - 1799372..1800157 (+) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  FIU19_RS15805 hld 1800754..1800834 (-) 81 WP_000046022.1 delta-hemolysin -
  FIU19_RS09735 (FIU19_09730) agrB 1801124..1801693 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  FIU19_RS09740 (FIU19_09735) agrD 1801690..1801830 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  FIU19_RS09745 (FIU19_09740) agrC 1801855..1803147 (+) 1293 WP_001554031.1 quorum-sensing sensor histidine kinase AgrC -
  FIU19_RS09750 (FIU19_09745) agrA 1803166..1803882 (+) 717 WP_064139150.1 quorum-sensing response regulator AgrA Regulator
  FIU19_RS09755 (FIU19_09750) - 1803954..1804061 (+) 108 WP_033841749.1 hypothetical protein -
  FIU19_RS09760 (FIU19_09755) - 1804249..1805208 (-) 960 WP_001253312.1 carbohydrate kinase family protein -
  FIU19_RS09765 (FIU19_09760) - 1805205..1806689 (-) 1485 WP_023487214.1 sucrose-6-phosphate hydrolase -
  FIU19_RS09770 (FIU19_09765) - 1806838..1807788 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27965.94 Da        Isoelectric Point: 6.0935

>NTDB_id=368791 FIU19_RS09750 WP_064139150.1 1803166..1803882(+) (agrA) [Staphylococcus aureus strain FDAARGOS_766]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRYHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=368791 FIU19_RS09750 WP_064139150.1 1803166..1803882(+) (agrA) [Staphylococcus aureus strain FDAARGOS_766]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATATCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996

Multiple sequence alignment