Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FIU13_RS05045 Genome accession   NZ_CP040997
Coordinates   975626..976339 (+) Length   237 a.a.
NCBI ID   WP_029714110.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_774     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 970626..981339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU13_RS05035 (FIU13_05035) treC 971696..973324 (-) 1629 WP_010922745.1 alpha,alpha-phosphotrehalase -
  FIU13_RS05040 (FIU13_05040) treP 973391..975415 (-) 2025 WP_010922746.1 PTS system trehalose-specific EIIBC component -
  FIU13_RS05045 (FIU13_05045) treR 975626..976339 (+) 714 WP_029714110.1 trehalose operon repressor Regulator
  FIU13_RS05055 (FIU13_05055) - 976618..976956 (-) 339 Protein_967 winged helix-turn-helix transcriptional regulator -
  FIU13_RS05060 (FIU13_05060) - 977143..978000 (+) 858 WP_010922747.1 VOC family protein -
  FIU13_RS05065 (FIU13_05065) yaaA 978042..978773 (+) 732 WP_010922748.1 peroxide stress protein YaaA -
  FIU13_RS05070 (FIU13_05070) nrdG 978947..979561 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FIU13_RS05075 (FIU13_05075) - 979561..980070 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  FIU13_RS05080 (FIU13_05080) - 980079..981014 (-) 936 WP_010922750.1 Gfo/Idh/MocA family protein -
  FIU13_RS10135 - 981043..981189 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27606.77 Da        Isoelectric Point: 9.6307

>NTDB_id=368601 FIU13_RS05045 WP_029714110.1 975626..976339(+) (treR) [Streptococcus pyogenes strain FDAARGOS_774]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLVLKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=368601 FIU13_RS05045 WP_029714110.1 975626..976339(+) (treR) [Streptococcus pyogenes strain FDAARGOS_774]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTGTCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment