Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FIU13_RS03505 Genome accession   NZ_CP040997
Coordinates   652538..653263 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain FDAARGOS_774     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 647538..658263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU13_RS03470 (FIU13_03470) rnpM 647572..647868 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  FIU13_RS03475 (FIU13_03475) nusA 647884..649041 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  FIU13_RS03480 (FIU13_03480) rimP 649216..649752 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  FIU13_RS03490 (FIU13_03490) trmB 650011..650646 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FIU13_RS03495 (FIU13_03495) ccrZ 650646..651437 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  FIU13_RS03500 (FIU13_03500) - 651501..652535 (-) 1035 WP_010922583.1 ABC transporter permease -
  FIU13_RS03505 (FIU13_03505) pptA 652538..653263 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  FIU13_RS03510 (FIU13_03510) - 653335..653754 (+) 420 WP_002983376.1 HIT family protein -
  FIU13_RS03515 (FIU13_03515) - 653751..654107 (+) 357 WP_002988657.1 hypothetical protein -
  FIU13_RS03520 (FIU13_03520) brpA 654218..655492 (-) 1275 WP_010922584.1 biofilm formation/cell division transcriptional regulator BrpA -
  FIU13_RS03525 (FIU13_03525) - 655501..656025 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  FIU13_RS03530 (FIU13_03530) tsaE 656000..656461 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FIU13_RS03535 (FIU13_03535) - 656615..658075 (-) 1461 WP_011285677.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=368595 FIU13_RS03505 WP_002983379.1 652538..653263(-) (pptA) [Streptococcus pyogenes strain FDAARGOS_774]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=368595 FIU13_RS03505 WP_002983379.1 652538..653263(-) (pptA) [Streptococcus pyogenes strain FDAARGOS_774]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment