Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxP   Type   Regulator
Locus tag   FIU11_RS16870 Genome accession   NZ_CP040991
Coordinates   262887..263984 (-) Length   365 a.a.
NCBI ID   WP_004726763.1    Uniprot ID   A0A0Q2SGB9
Organism   Vibrio furnissii strain FDAARGOS_777     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 257887..268984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU11_RS16850 (FIU11_16850) - 258441..258812 (+) 372 WP_004726757.1 YgiW/YdeI family stress tolerance OB fold protein -
  FIU11_RS16855 (FIU11_16855) - 258964..259488 (+) 525 WP_004726759.1 hypothetical protein -
  FIU11_RS16860 (FIU11_16860) - 259613..260293 (+) 681 WP_004726760.1 PilZ domain-containing protein -
  FIU11_RS16865 (FIU11_16865) luxQ 260290..262866 (-) 2577 WP_038151558.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ Regulator
  FIU11_RS16870 (FIU11_16870) luxP 262887..263984 (-) 1098 WP_004726763.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  FIU11_RS16875 (FIU11_16875) - 264404..264694 (-) 291 WP_004726765.1 GIY-YIG nuclease family protein -
  FIU11_RS16880 (FIU11_16880) - 264705..265340 (-) 636 WP_004726766.1 YceH family protein -
  FIU11_RS16885 (FIU11_16885) - 265384..265581 (-) 198 WP_004726768.1 hypothetical protein -
  FIU11_RS16890 (FIU11_16890) - 265771..266088 (+) 318 WP_004726770.1 DUF496 family protein -
  FIU11_RS16895 (FIU11_16895) - 266250..267218 (-) 969 WP_004726771.1 phage integrase -
  FIU11_RS16900 (FIU11_16900) - 267536..268327 (+) 792 WP_004726773.1 DUF3800 domain-containing protein -

Sequence


Protein


Download         Length: 365 a.a.        Molecular weight: 41539.74 Da        Isoelectric Point: 5.2793

>NTDB_id=368551 FIU11_RS16870 WP_004726763.1 262887..263984(-) (luxP) [Vibrio furnissii strain FDAARGOS_777]
MKKTLFLSLLLGFTPFASSYSSQVLNGYWHYQEFLNANPQQKALTESLSDAVRQSSQRLTVKQQTPVTISVVYPGQQISD
YWVRNIKAFEMRLEELGIEYQINQVFTRPNQDTRQQSLSLMEAVKNNTDYLIFTLDTTRHRKFIEHVLNSSPTKLILQNI
TTPVRDWDERQPMMYVGFDHELGAQQLAQYYREHVPKGSKYSVLYFSEGYVSDARGDTFIQQMESTGDYQLASSYYTKAT
QESGYEATVNIVKNDPDIKFIYACSTDVALGAAKALQALKREDIQVNGWGGGSAELEALDEGHLDVTVMRINDDTGIAMA
EAIKRDLEGLAVPVVYSGDFEIVTKDDQPKKIGLFKQRAFRYSDR

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=368551 FIU11_RS16870 WP_004726763.1 262887..263984(-) (luxP) [Vibrio furnissii strain FDAARGOS_777]
ATGAAGAAAACGCTTTTTCTTTCTCTTTTACTTGGTTTCACTCCTTTTGCCTCTTCGTATTCATCACAAGTGCTGAATGG
TTACTGGCATTATCAGGAATTTCTGAATGCCAATCCGCAACAAAAGGCACTGACGGAGTCGTTGTCTGATGCGGTGCGTC
AATCGTCTCAGCGGCTGACGGTCAAACAACAAACGCCGGTGACCATTTCGGTGGTTTATCCGGGGCAGCAGATCTCCGAT
TACTGGGTGCGCAACATCAAAGCGTTTGAAATGCGATTGGAAGAGTTAGGTATTGAATACCAGATTAATCAGGTGTTTAC
GCGCCCGAACCAAGACACTCGTCAACAAAGCTTGTCGTTGATGGAAGCGGTGAAGAACAACACGGATTATTTGATTTTCA
CGCTGGATACAACGCGCCACCGCAAGTTTATTGAACACGTTCTGAATTCGTCACCGACCAAATTGATTTTGCAGAATATC
ACCACGCCGGTTCGAGACTGGGATGAACGCCAGCCGATGATGTACGTTGGGTTTGACCATGAACTCGGTGCGCAGCAACT
TGCGCAGTATTATCGCGAACATGTGCCCAAAGGCAGCAAGTATTCGGTGCTGTATTTTTCTGAAGGGTACGTCAGCGATG
CGCGTGGCGACACTTTCATTCAGCAGATGGAAAGCACGGGCGATTACCAGCTGGCCTCGTCGTATTACACCAAAGCGACC
CAAGAAAGTGGCTATGAAGCCACTGTTAACATTGTCAAAAATGACCCGGATATTAAATTTATTTACGCCTGTTCCACCGA
TGTGGCACTGGGCGCAGCCAAGGCGCTACAAGCGCTAAAACGTGAAGATATTCAGGTGAACGGCTGGGGTGGTGGCTCGG
CAGAGCTAGAAGCCTTGGATGAAGGTCATCTTGATGTTACTGTCATGAGAATCAATGATGATACCGGCATTGCGATGGCG
GAAGCGATCAAACGTGATTTGGAAGGTTTGGCCGTGCCCGTGGTGTATTCCGGTGACTTTGAGATCGTGACCAAAGACGA
TCAGCCGAAAAAAATTGGTTTGTTTAAGCAACGCGCCTTTCGTTATTCCGACCGTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

70.411

100

0.704


Multiple sequence alignment