Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxO   Type   Regulator
Locus tag   FIU11_RS07265 Genome accession   NZ_CP040990
Coordinates   1435204..1436565 (+) Length   453 a.a.
NCBI ID   WP_086027297.1    Uniprot ID   -
Organism   Vibrio furnissii strain FDAARGOS_777     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context


Location: 1430204..1441565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU11_RS07260 (FIU11_07260) uvrB 1432887..1434917 (+) 2031 WP_004726644.1 excinuclease ABC subunit UvrB -
  FIU11_RS07265 (FIU11_07265) luxO 1435204..1436565 (+) 1362 WP_086027297.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  FIU11_RS07270 (FIU11_07270) luxU 1436572..1436910 (+) 339 WP_004726642.1 quorum-sensing phosphorelay protein LuxU -
  FIU11_RS07275 (FIU11_07275) - 1436899..1437789 (-) 891 WP_004726641.1 YvcK family protein -
  FIU11_RS07280 (FIU11_07280) moaA 1438099..1439088 (+) 990 WP_004726640.1 GTP 3',8-cyclase MoaA -
  FIU11_RS07285 (FIU11_07285) moaB 1439159..1439671 (+) 513 WP_004726639.1 molybdenum cofactor biosynthesis protein B -
  FIU11_RS07290 (FIU11_07290) moaC 1439681..1440160 (+) 480 WP_004726638.1 cyclic pyranopterin monophosphate synthase MoaC -
  FIU11_RS07295 (FIU11_07295) moaD 1440157..1440402 (+) 246 WP_004726637.1 molybdopterin synthase sulfur carrier subunit -
  FIU11_RS07300 (FIU11_07300) moaE 1440404..1440859 (+) 456 WP_004726636.1 molybdopterin synthase catalytic subunit MoaE -

Sequence


Protein


Download         Length: 453 a.a.        Molecular weight: 50359.61 Da        Isoelectric Point: 5.7310

>NTDB_id=368532 FIU11_RS07265 WP_086027297.1 1435204..1436565(+) (luxO) [Vibrio furnissii strain FDAARGOS_777]
MVEDTASVAALYRSYLTPLEIDINIVGTGREAIESIAHREPDLILLDLRLPDMTGMDVLHAVKQRSPDVPVIFMTAHGSI
DTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKANKLKNETDNPGNQNYQGFIGSSQTMLAVYRTIDSAATSKASIFIT
GESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGGTLFLDELCEMDLD
LQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRERGDDVIEIAYSLLG
YMSKEEGKGFVRLAPDVVERFKQYEWPGNVRQLQNVLRNVVVLNEGREIALTMLPPPLNQLSDSRINVPKASPAPVSVHE
IFPLWMTEKQAIEKAIEACDGNIPRAAGYLDVSPSTIYRKLQTWNEKVQEKEK

Nucleotide


Download         Length: 1362 bp        

>NTDB_id=368532 FIU11_RS07265 WP_086027297.1 1435204..1436565(+) (luxO) [Vibrio furnissii strain FDAARGOS_777]
ATGGTCGAAGACACGGCGTCGGTTGCGGCGTTGTATCGTTCGTACCTGACACCGCTCGAGATCGATATCAACATTGTCGG
AACGGGACGTGAAGCGATCGAGAGTATCGCCCATCGCGAGCCGGATCTGATCCTCCTCGATCTGCGCCTGCCGGACATGA
CGGGTATGGACGTCTTGCATGCGGTGAAACAGCGTTCACCGGATGTGCCGGTGATTTTTATGACGGCGCATGGCTCCATT
GATACCGCCGTCGAAGCCATGCGCCACGGCGCGCAAGATTTCCTCATCAAACCGTGCGAAGCCGACCGTTTGCGTGTGAC
GGTCAACAACGCCATTCGCAAGGCAAACAAACTCAAAAACGAGACCGACAATCCGGGTAATCAGAATTACCAAGGGTTCA
TTGGCAGCAGCCAGACCATGTTGGCGGTGTATCGCACCATCGACTCTGCGGCCACCAGTAAAGCGAGTATTTTCATTACC
GGCGAAAGTGGTACCGGCAAAGAGGTGTGCGCCGAAGCCATCCATGCAGCCAGCAAGCGCGGCGACAAGCCGTTCATTGC
TATTAACTGTGCGGCCATTCCCAAAGATCTGATTGAAAGTGAGTTGTTCGGTCACGTCAAAGGTGCGTTTACTGGCGCGG
CGACGGATCGTCAGGGCGCGGCAGAACTGGCCGATGGCGGCACCTTGTTCTTGGACGAGCTGTGTGAAATGGATTTGGAT
CTGCAAACCAAGCTGCTGCGTTTTATTCAGACCGGGACCTTCCAGAAAGTCGGATCGTCTAAAATGAAGAGTGTGGACGT
GCGTTTTGTGTGTGCGACCAACCGTGACCCTTGGAAAGAAGTGCAAGAAGGGCGTTTTCGTGAAGACTTGTATTACCGTC
TGTACGTGATTCCGTTGCATCTGCCCCCTTTGCGTGAGCGCGGCGATGATGTGATTGAAATCGCGTATTCACTACTGGGG
TACATGTCGAAAGAAGAAGGCAAAGGCTTTGTGCGTTTGGCGCCAGATGTCGTAGAGCGCTTCAAACAGTACGAATGGCC
GGGGAACGTGCGCCAGCTGCAGAACGTGCTGCGCAACGTGGTGGTGCTTAATGAAGGGCGTGAAATTGCGCTGACAATGC
TGCCGCCACCGCTGAACCAATTGAGTGACTCACGCATCAATGTCCCGAAAGCCAGCCCAGCGCCGGTGTCGGTGCATGAA
ATTTTCCCGTTATGGATGACAGAAAAGCAGGCGATCGAAAAAGCAATCGAGGCCTGTGATGGCAATATTCCGCGTGCTGC
GGGCTATTTGGATGTCAGTCCATCCACCATCTACCGCAAGCTGCAAACCTGGAATGAAAAGGTGCAGGAAAAGGAAAAGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

90.828

98.675

0.896


Multiple sequence alignment