Detailed information NTG0368514

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FIU11_RS01485
• Genome accession: NZ_CP040990
• Coordinates: 204024..205031 (-)
• Length: 335 a.a.
• NCBI ID: WP_004728525.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain FDAARGOS_777
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 199024..210031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU11_RS01460 (FIU11_01460)	rraA	199656..200192 (-)	537	WP_004728530.1	ribonuclease E activity regulator RraA	-
FIU11_RS01465 (FIU11_01465)	-	200268..201185 (-)	918	WP_004728529.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FIU11_RS01470 (FIU11_01470)	hslU	201279..202610 (-)	1332	WP_004728528.1	HslU--HslV peptidase ATPase subunit	-
FIU11_RS01475 (FIU11_01475)	hslV	202647..203204 (-)	558	WP_014204312.1	ATP-dependent protease subunit HslV	-
FIU11_RS01480 (FIU11_01480)	-	203343..203894 (-)	552	WP_038152602.1	SPOR domain-containing protein	-
FIU11_RS01485 (FIU11_01485)	cytR	204024..205031 (-)	1008	WP_004728525.1	DNA-binding transcriptional regulator CytR	Regulator
FIU11_RS01490 (FIU11_01490)	priA	205339..207540 (-)	2202	WP_004728524.1	primosomal protein N'	-
FIU11_RS01495 (FIU11_01495)	rpmE	207787..208005 (+)	219	WP_004728523.1	50S ribosomal protein L31	-
FIU11_RS01500 (FIU11_01500)	-	208216..209490 (+)	1275	WP_004728522.1	malic enzyme-like NAD(P)-binding protein	-
FIU11_RS01505 (FIU11_01505)	metJ	209567..209884 (-)	318	WP_004728521.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36886.40 Da
• Isoelectric Point: 6.3510

>NTDB_id=368514 FIU11_RS01485 WP_004728525.1 204024..205031(-) (cytR) [Vibrio furnissii strain FDAARGOS_777]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQIAGPEAAVLCQFRQQGYQQALRRAGISRNPTYSTIGDFTFESGAKAVRQLMALPEPPTA
IFCHNDTMAIGAIQEAKRLGMRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLD
TQLVIRESAAPPRSA

Nucleotide

• Length: 1008 bp

>NTDB_id=368514 FIU11_RS01485 WP_004728525.1 204024..205031(-) (cytR) [Vibrio furnissii strain FDAARGOS_777]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTATCGACGGCGACAGTCTCGCGCGCTCTGATGAATCCCGAGAA
AGTTTCAGCCTCAACTCGTAAACGGGTTGAAGAGGCGGTTTTAGAAGCTGGCTATTCACCGAATTCTTTAGCCCGAAATC
TGCGTCGCAATGAATCGAAAACCATTGTCGCGATCGTGCCGGACATCTGTGATCCTTATTACACCGAAATTATTCGTGGT
ATCGAAGACGCCGCGATGGAACACGGTTATCTGGTACTGCTGGGTGACAGCGGTCAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACTTGGTGTTTACCAAACAGGCGGACGGTATGCTATTGCTGGGGACCGATTTGCCGTTTGACGTGAGCAAACCTG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCAGAACTTGAATTGCCGACGGTGCATATCGATAAC
CTGACATCTGCCTTTGAAGCGGTGAACTATCTGACGCAGATGGGGCACAAACGCATCGCGCAGATTGCCGGTCCTGAAGC
GGCGGTGTTGTGTCAGTTCCGTCAGCAAGGGTATCAACAAGCCCTGCGCCGCGCGGGGATTTCACGCAATCCAACCTACA
GTACCATCGGTGACTTTACGTTTGAGTCGGGGGCCAAAGCGGTGCGCCAATTGATGGCCCTGCCAGAGCCGCCGACAGCC
ATTTTCTGTCACAACGATACCATGGCGATTGGTGCCATTCAGGAAGCCAAGCGCTTGGGCATGCGTGTGCCGCAAGACCT
GTCTGTGGTCGGCTTTGATGACATTCAGTTTGCGCAGTACTGCGATCCACCGCTAACCACCATTTCTCAGCCGCGTTACG
AGATCGGCCGTCAGGCGATGTTGATGATGCTTGAGTTACTGCGGGGTCATGATGTGCGTGCGGGCTCGCGTTTGCTCGAC
ACCCAATTGGTCATTCGCGAGAGTGCAGCGCCGCCCCGCTCGGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	93.373	99.104	0.925
cytR	Vibrio parahaemolyticus RIMD 2210633	90.149	100	0.901