Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | FIU05_RS13790 | Genome accession | NZ_CP040987 |
| Coordinates | 3007462..3008169 (-) | Length | 235 a.a. |
| NCBI ID | WP_010946369.1 | Uniprot ID | Q5ZXU9 |
| Organism | Legionella pneumophila strain FDAARGOS_779 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3002462..3013169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU05_RS13775 (FIU05_13775) | - | 3005337..3005849 (-) | 513 | WP_010946366.1 | pilus assembly protein | - |
| FIU05_RS13780 (FIU05_13780) | - | 3005846..3006913 (-) | 1068 | WP_010946367.1 | PilW family protein | - |
| FIU05_RS13785 (FIU05_13785) | pilV | 3006910..3007449 (-) | 540 | WP_010946368.1 | type IV pilus modification protein PilV | - |
| FIU05_RS13790 (FIU05_13790) | fimT | 3007462..3008169 (-) | 708 | WP_010946369.1 | GspH/FimT family pseudopilin | Machinery gene |
| FIU05_RS13795 (FIU05_13795) | - | 3008391..3009251 (-) | 861 | WP_011213225.1 | polysaccharide deacetylase family protein | - |
| FIU05_RS13800 (FIU05_13800) | - | 3009428..3010777 (-) | 1350 | WP_010946371.1 | lpg0634 family Dot/Icm T4SS effector | - |
| FIU05_RS13805 (FIU05_13805) | - | 3011065..3012546 (+) | 1482 | WP_010946372.1 | phospholipid carrier-dependent glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24868.47 Da Isoelectric Point: 7.0384
>NTDB_id=368462 FIU05_RS13790 WP_010946369.1 3007462..3008169(-) (fimT) [Legionella pneumophila strain FDAARGOS_779]
MNKVITESQKFTLRNIANMLFCVESSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTLRNIANMLFCVESSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=368462 FIU05_RS13790 WP_010946369.1 3007462..3008169(-) (fimT) [Legionella pneumophila strain FDAARGOS_779]
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCTGCGCAACATAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
GTTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTTTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCTGCGCAACATAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
GTTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTTTGAACTGCCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
100 |
100 |
1 |