Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | FIU05_RS05315 | Genome accession | NZ_CP040987 |
| Coordinates | 1177161..1177475 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain FDAARGOS_779 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1172161..1182475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU05_RS05285 (FIU05_05285) | - | 1172590..1173090 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| FIU05_RS05295 (FIU05_05295) | - | 1173582..1174442 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| FIU05_RS05300 (FIU05_05300) | - | 1174559..1175752 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| FIU05_RS05305 (FIU05_05305) | lpp1976 | 1175862..1176419 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| FIU05_RS05310 (FIU05_05310) | lpp1977 | 1176416..1177222 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| FIU05_RS05315 (FIU05_05315) | lpp1978 | 1177161..1177475 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| FIU05_RS05320 (FIU05_05320) | hisC | 1177635..1178744 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| FIU05_RS05325 (FIU05_05325) | - | 1178781..1179122 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| FIU05_RS05330 (FIU05_05330) | secF | 1179295..1180212 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| FIU05_RS05335 (FIU05_05335) | secD | 1180225..1182081 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| FIU05_RS05340 (FIU05_05340) | yajC | 1182103..1182438 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=368445 FIU05_RS05315 WP_010947713.1 1177161..1177475(-) (lpp1978) [Legionella pneumophila strain FDAARGOS_779]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=368445 FIU05_RS05315 WP_010947713.1 1177161..1177475(-) (lpp1978) [Legionella pneumophila strain FDAARGOS_779]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |